Functional clusters
Information
- Type InterPro
- Description Protein NEDD1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 5 | CH_acertr_495 | 3 | 31 | 0.0000334772 |
| Capsicum annuum | PGAv.1.6.scaffold986 | 5 | CH_can_592 | 2 | 2 | 0.0000826105 |
| Citrus clementina | scaffold_4 | 5 | CH_ccl_295 | 3 | 5 | 0.000000100932 |
| Gossypium hirsutum | D10 | 5 | CH_ghi_318 | 4 | 11 | 0.000000000659466 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_89 | 5 | 6 | 0.00000000000000223058 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_559 | 3 | 3 | 0.0000000834367 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_902 | 2 | 2 | 0.000387184 |
| Salix brachista | GWHAAZH00000010 | 5 | CH_sbr_557 | 2 | 2 | 0.000189042 |
| Selenicereus undatus | Scaffold_33679 | 5 | CH_sun_360 | 2 | 3 | 0.000653935 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_739 | 2 | 5 | 0.000732306 |
| Vanilla planifolia | CM028159.1 | 5 | CH_vpl_98 | 3 | 3 | 0.00000000818945 |
| Acer truncatum | chr12 | 6 | CH_acertr_495 | 3 | 31 | 0.0000334772 |
| Capsicum annuum | PGAv.1.6.scaffold986 | 6 | CH_can_592 | 2 | 2 | 0.0000826105 |
| Citrus clementina | scaffold_4 | 6 | CH_ccl_295 | 3 | 5 | 0.000000100932 |
| Gossypium hirsutum | D10 | 6 | CH_ghi_318 | 4 | 11 | 0.000000000659466 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_89 | 5 | 6 | 0.00000000000000223058 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_559 | 3 | 3 | 0.0000000834367 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_902 | 2 | 2 | 0.000387184 |
| Salix brachista | GWHAAZH00000010 | 6 | CH_sbr_557 | 2 | 2 | 0.000189042 |
| Selenicereus undatus | Scaffold_33679 | 6 | CH_sun_360 | 2 | 3 | 0.000653935 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_739 | 2 | 5 | 0.000732306 |
| Vanilla planifolia | CM028159.1 | 6 | CH_vpl_98 | 3 | 3 | 0.00000000818945 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |