Functional clusters
Information
- Type InterPro
- Description F-box protein At3g18720-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_263 | 5 | 45 | 0.0000000566312 |
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_237 | 3 | 3 | 0.00000438992 |
| Brassica napus | C07 | 5 | CH_bna_1242 | 2 | 2 | 0.000278425 |
| Brassica oleracea | C7 | 5 | CH_bol_686 | 2 | 2 | 0.000196117 |
| Corylus avellana | 10 | 5 | CH_cav_838 | 2 | 2 | 0.000766695 |
| Cardamine hirsuta | Chr3 | 5 | CH_chi_651 | 2 | 2 | 0.000207361 |
| Carica papaya | supercontig_130 | 5 | CH_cpa_23 | 5 | 6 | 0.0000000000000220573 |
| Daucus carota | DCARv2_Chr7 | 5 | CH_dca_242 | 3 | 4 | 0.000000488074 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_92 | 7 | 30 | 6.39748e-17 |
| Hydrangea macrophylla | Hma1.2p1_0071F.1 | 5 | CH_hma_518 | 2 | 3 | 0.000333241 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_614 | 3 | 7 | 0.00000658724 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_19 | 15 | 29 | 1.24529e-29 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_3 | 23 | 67 | 1.61824e-42 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_55 | 10 | 14 | 1.46515e-20 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_580 | 6 | 52 | 0.0000308287 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_626 | 4 | 9 | 0.0000619356 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_743 | 3 | 3 | 0.000267611 |
| Magnolia biondii | Chr19 | 5 | CH_mbi_327 | 5 | 75 | 0.0000000150568 |
| Medicago truncatula | chr7 | 5 | CH_mtr_570 | 3 | 3 | 0.000000141802 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_569 | 2 | 2 | 0.00015649 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1071 | 3 | 3 | 0.0000070812 |
| Quercus lobata | Scq3eQI_100 | 5 | CH_qlo_1072 | 3 | 3 | 0.0000070812 |
| Quercus lobata | CM012294 | 5 | CH_qlo_31 | 14 | 25 | 7.17372e-37 |
| Rhododendron simsii | chr05 | 5 | CH_rsi_552 | 3 | 4 | 0.00000714406 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_682 | 2 | 3 | 0.000409466 |
| Schrenkiella parvula | ch3-6 | 5 | CH_spa_248 | 2 | 2 | 0.000078734 |
| Trochodendron aralioides | group1 | 5 | CH_tar_131 | 7 | 62 | 0.000000000302308 |
| Trochodendron aralioides | group14 | 5 | CH_tar_159 | 4 | 4 | 0.00000000474923 |
| Tarenaya hassleriana | NW_010965775.1 | 5 | CH_tha_201 | 2 | 2 | 0.000069847 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_635 | 2 | 2 | 0.000227092 |
| Acer truncatum | chr2 | 6 | CH_acertr_263 | 5 | 45 | 0.0000000566312 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_237 | 3 | 3 | 0.00000438992 |
| Brassica napus | C07 | 6 | CH_bna_1242 | 2 | 2 | 0.000278425 |
| Brassica oleracea | C7 | 6 | CH_bol_686 | 2 | 2 | 0.000196117 |
| Corylus avellana | 10 | 6 | CH_cav_838 | 2 | 2 | 0.000766695 |
| Cardamine hirsuta | Chr3 | 6 | CH_chi_651 | 2 | 2 | 0.000207361 |
| Carica papaya | supercontig_130 | 6 | CH_cpa_23 | 5 | 6 | 0.0000000000000220573 |
| Daucus carota | DCARv2_Chr7 | 6 | CH_dca_242 | 3 | 4 | 0.000000488074 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_92 | 7 | 30 | 6.39748e-17 |
| Hydrangea macrophylla | Hma1.2p1_0071F.1 | 6 | CH_hma_518 | 2 | 3 | 0.000333241 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_614 | 3 | 7 | 0.00000658724 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_19 | 15 | 29 | 1.24529e-29 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_3 | 23 | 67 | 1.61824e-42 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_55 | 10 | 14 | 1.46515e-20 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_580 | 6 | 52 | 0.0000308287 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_626 | 4 | 9 | 0.0000619356 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_743 | 3 | 3 | 0.000267611 |
| Magnolia biondii | Chr19 | 6 | CH_mbi_327 | 5 | 75 | 0.0000000150568 |
| Medicago truncatula | chr7 | 6 | CH_mtr_570 | 3 | 3 | 0.000000141802 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_569 | 2 | 2 | 0.00015649 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1071 | 3 | 3 | 0.0000070812 |
| Quercus lobata | Scq3eQI_100 | 6 | CH_qlo_1072 | 3 | 3 | 0.0000070812 |
| Quercus lobata | CM012294 | 6 | CH_qlo_31 | 14 | 25 | 7.17372e-37 |
| Rhododendron simsii | chr05 | 6 | CH_rsi_552 | 3 | 4 | 0.00000714406 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_682 | 2 | 3 | 0.000409466 |
| Schrenkiella parvula | ch3-6 | 6 | CH_spa_248 | 2 | 2 | 0.000078734 |
| Trochodendron aralioides | group1 | 6 | CH_tar_131 | 7 | 62 | 0.000000000302308 |
| Trochodendron aralioides | group14 | 6 | CH_tar_159 | 4 | 4 | 0.00000000474923 |
| Tarenaya hassleriana | NW_010965775.1 | 6 | CH_tha_201 | 2 | 2 | 0.000069847 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_635 | 2 | 2 | 0.000227092 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |