Functional clusters
Information
- Type InterPro
- Description Transcription factor RKD-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold164 | 5 | CH_can_864 | 2 | 2 | 0.000826105 |
| Carya illinoinensis | Chr15 | 5 | CH_cil_305 | 4 | 11 | 0.0000000494496 |
| Glycine max | Gm20 | 5 | CH_gma_477 | 3 | 4 | 0.00000705185 |
| Lotus japonicus | chr1 | 5 | CH_lja_251 | 3 | 3 | 0.000000920437 |
| Nicotiana tabacum | Nitab4.5_0000702 | 5 | CH_nta_230 | 2 | 2 | 0.000109727 |
| Physcomitrium patens | Chr20 | 5 | CH_ppa_429 | 2 | 2 | 0.000919089 |
| Selaginella moellendorffii | scaffold_15 | 5 | CH_smo_9 | 7 | 8 | 1.43321e-18 |
| Capsicum annuum | PGAv.1.6.scaffold164 | 6 | CH_can_864 | 2 | 2 | 0.000826105 |
| Carya illinoinensis | Chr15 | 6 | CH_cil_305 | 4 | 11 | 0.0000000494496 |
| Glycine max | Gm20 | 6 | CH_gma_477 | 3 | 4 | 0.00000705185 |
| Lotus japonicus | chr1 | 6 | CH_lja_251 | 3 | 3 | 0.000000920437 |
| Nicotiana tabacum | Nitab4.5_0000702 | 6 | CH_nta_230 | 2 | 2 | 0.000109727 |
| Physcomitrium patens | Chr20 | 6 | CH_ppa_429 | 2 | 2 | 0.000919089 |
| Selaginella moellendorffii | scaffold_15 | 6 | CH_smo_9 | 7 | 8 | 1.43321e-18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |