Functional clusters
Information
- Type InterPro
- Description Heavy metal-associated isoprenylated plant protein 1/3/5/6
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr8 | 5 | CH_acertr_374 | 3 | 5 | 0.00000149066 |
| Capsicum annuum | PGAv.1.6.scaffold488 | 5 | CH_can_373 | 3 | 4 | 0.00000143297 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_757 | 2 | 3 | 0.000738229 |
| Carya illinoinensis | Chr09 | 5 | CH_cil_764 | 2 | 2 | 0.000371897 |
| Durio zibethinus | NW_019167882.1 | 5 | CH_dzi_647 | 2 | 2 | 0.000973326 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_734 | 3 | 3 | 0.000000179842 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_680 | 2 | 2 | 0.00080416 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_1195 | 2 | 2 | 0.0008115 |
| Manihot esculenta | Chromosome04 | 5 | CH_mes_611 | 3 | 23 | 0.00034585 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_764 | 2 | 2 | 0.000792184 |
| Petunia axillaris | Peaxi162Scf00488 | 5 | CH_pax_653 | 2 | 2 | 0.000422134 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_115 | 4 | 4 | 0.0000000000443651 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_321 | 3 | 3 | 0.000000180867 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_282 | 3 | 3 | 0.000000103868 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_878 | 2 | 2 | 0.000512453 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_785 | 2 | 2 | 0.000756974 |
| Acer truncatum | chr8 | 6 | CH_acertr_374 | 3 | 5 | 0.00000149066 |
| Capsicum annuum | PGAv.1.6.scaffold488 | 6 | CH_can_373 | 3 | 4 | 0.00000143297 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_757 | 2 | 3 | 0.000738229 |
| Carya illinoinensis | Chr09 | 6 | CH_cil_764 | 2 | 2 | 0.000371897 |
| Durio zibethinus | NW_019167882.1 | 6 | CH_dzi_647 | 2 | 2 | 0.000973326 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_734 | 3 | 3 | 0.000000179842 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_680 | 2 | 2 | 0.00080416 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_1195 | 2 | 2 | 0.0008115 |
| Manihot esculenta | Chromosome04 | 6 | CH_mes_611 | 3 | 23 | 0.00034585 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_764 | 2 | 2 | 0.000792184 |
| Petunia axillaris | Peaxi162Scf00488 | 6 | CH_pax_653 | 2 | 2 | 0.000422134 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_115 | 4 | 4 | 0.0000000000443651 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_321 | 3 | 3 | 0.000000180867 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_282 | 3 | 3 | 0.000000103868 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_878 | 2 | 2 | 0.000512453 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_785 | 2 | 2 | 0.000756974 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |