Functional clusters

Information

  • Type InterPro
  • Description Putative E3 ubiquitin-protein ligase RING1a/b

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr5 5 CH_camsi_147 5 10 0.0000000000000501324
Carica papaya supercontig_83 5 CH_cpa_115 3 4 0.0000000542253
Daucus carota DCARv2_Chr2 5 CH_dca_657 2 3 0.000573967
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_550 2 2 0.0000448722
Lupinus albus Lalb_Chr24 5 CH_lal_789 2 2 0.000787236
Manihot esculenta Chromosome13 5 CH_mes_133 6 39 0.000000000000356481
Marchantia polymorpha scaffold_33 5 CH_mpo_66 3 3 0.0000000731891
Vigna mungo CM024069.1 5 CH_vmu_199 3 4 0.000000500961
Camellia sinensis var. sinensis Chr5 6 CH_camsi_147 5 10 0.0000000000000501324
Carica papaya supercontig_83 6 CH_cpa_115 3 4 0.0000000542253
Daucus carota DCARv2_Chr2 6 CH_dca_657 2 3 0.000573967
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_550 2 2 0.0000448722
Lupinus albus Lalb_Chr24 6 CH_lal_789 2 2 0.000787236
Manihot esculenta Chromosome13 6 CH_mes_133 6 39 0.000000000000356481
Marchantia polymorpha scaffold_33 6 CH_mpo_66 3 3 0.0000000731891
Vigna mungo CM024069.1 6 CH_vmu_199 3 4 0.000000500961

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001