Functional clusters
Information
- Type InterPro
- Description GATA transcription factor 26/27
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold1352 | 5 | CH_can_222 | 4 | 5 | 0.00000000418527 |
| Capsicum annuum | PGAv.1.6.scaffold322 | 5 | CH_can_246 | 4 | 6 | 0.000000012552 |
| Chlamydomonas reinhardtii | chromosome_5 | 5 | CH_cre_169 | 2 | 2 | 0.0003412 |
| Erythranthe guttata | scaffold_5 | 5 | CH_egut_523 | 2 | 2 | 0.0000728147 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_718 | 2 | 2 | 0.000154202 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_352 | 3 | 4 | 0.000000997006 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_276 | 4 | 11 | 0.00000000931967 |
| Capsicum annuum | PGAv.1.6.scaffold1352 | 6 | CH_can_222 | 4 | 5 | 0.00000000418527 |
| Capsicum annuum | PGAv.1.6.scaffold322 | 6 | CH_can_246 | 4 | 6 | 0.000000012552 |
| Chlamydomonas reinhardtii | chromosome_5 | 6 | CH_cre_169 | 2 | 2 | 0.0003412 |
| Erythranthe guttata | scaffold_5 | 6 | CH_egut_523 | 2 | 2 | 0.0000728147 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_718 | 2 | 2 | 0.000154202 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_352 | 3 | 4 | 0.000000997006 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_276 | 4 | 11 | 0.00000000931967 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |