Functional clusters

Information

  • Type InterPro
  • Description Pentatricopeptide repeat-containing protein BIR6-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group11 5 CH_ach_554 2 2 0.000543213
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 5 CH_arhy_1319 2 2 0.000838273
Cannabis sativa NC_044372.1 5 CH_cansat_475 2 2 0.000196993
Coffea canephora chr4 5 CH_ccan_109 3 6 0.00000000217658
Erythranthe guttata scaffold_8 5 CH_egut_609 2 2 0.000218444
Glycine max Gm17 5 CH_gma_836 2 2 0.000379557
Gossypium raimondii Chr07 5 CH_gra_525 2 2 0.000160832
Medicago truncatula chr4 5 CH_mtr_162 5 5 0.00000000000000119699
Pisum sativum chr4LG4 5 CH_psa_638 2 2 0.000312981
Phaseolus vulgaris Chr03 5 CH_pvu_631 2 2 0.000440836
Rhododendron simsii chr10 5 CH_rsi_267 4 8 0.000000000282117
Solanum pennellii Spenn-ch03 5 CH_spe_740 2 2 0.000266874
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_783 2 2 0.000756974
Trifolium pratense Tp57577_TGAC_v2_LG5 5 CH_tpr_784 2 2 0.000756974
Vigna mungo CM024074.1 5 CH_vmu_472 2 2 0.000193842
Actinidia chinensis Lachesis_group11 6 CH_ach_554 2 2 0.000543213
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 6 CH_arhy_1319 2 2 0.000838273
Cannabis sativa NC_044372.1 6 CH_cansat_475 2 2 0.000196993
Coffea canephora chr4 6 CH_ccan_109 3 6 0.00000000217658
Erythranthe guttata scaffold_8 6 CH_egut_609 2 2 0.000218444
Glycine max Gm17 6 CH_gma_836 2 2 0.000379557
Gossypium raimondii Chr07 6 CH_gra_525 2 2 0.000160832
Medicago truncatula chr4 6 CH_mtr_162 5 5 0.00000000000000119699
Pisum sativum chr4LG4 6 CH_psa_638 2 2 0.000312981
Phaseolus vulgaris Chr03 6 CH_pvu_631 2 2 0.000440836
Rhododendron simsii chr10 6 CH_rsi_267 4 8 0.000000000282117
Solanum pennellii Spenn-ch03 6 CH_spe_740 2 2 0.000266874
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_783 2 2 0.000756974
Trifolium pratense Tp57577_TGAC_v2_LG5 6 CH_tpr_784 2 2 0.000756974
Vigna mungo CM024074.1 6 CH_vmu_472 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001