Functional clusters
Information
- Type InterPro
- Description SNF2 domain-containing protein CLSY/DRD1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_368 | 5 | CH_aag_245 | 3 | 19 | 0.000186861 |
| Actinidia chinensis | Lachesis_group3 | 5 | CH_ach_175 | 3 | 3 | 0.00000161118 |
| Avicennia marina | ScioBoG_102835_HRSCAF_103059 | 5 | CH_ama_244 | 2 | 2 | 0.000862218 |
| Brassica carinata | ChrC05 | 5 | CH_bca_295 | 4 | 4 | 0.000000000922079 |
| Brassica carinata | ChrB02 | 5 | CH_bca_5 | 10 | 11 | 3.22323e-30 |
| Brassica napus | A08 | 5 | CH_bna_1132 | 3 | 12 | 0.000174871 |
| Brassica oleracea | C7 | 5 | CH_bol_165 | 4 | 6 | 0.00000000480699 |
| Brassica oleracea | C8 | 5 | CH_bol_709 | 3 | 12 | 0.000287181 |
| Capsicum annuum | PGAv.1.6.scaffold649 | 5 | CH_can_421 | 3 | 4 | 0.00000491257 |
| Capsicum annuum | PGAv.1.6.scaffold572 | 5 | CH_can_450 | 3 | 5 | 0.0000122783 |
| Corylus avellana | 1 | 5 | CH_cav_383 | 3 | 8 | 0.00000986962 |
| Coffea canephora | chr0 | 5 | CH_ccan_720 | 2 | 4 | 0.000919902 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_191 | 4 | 5 | 0.00000000675992 |
| Carica papaya | supercontig_19 | 5 | CH_cpa_519 | 2 | 2 | 0.000285198 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_796 | 2 | 2 | 0.000589102 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_247 | 4 | 5 | 0.000000000109057 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_1236 | 2 | 2 | 0.000898311 |
| Malus domestica | Chr17 | 5 | CH_mdo_1259 | 2 | 2 | 0.000379212 |
| Medicago truncatula | chr7 | 5 | CH_mtr_1027 | 3 | 8 | 0.000115565 |
| Medicago truncatula | chr7 | 5 | CH_mtr_412 | 4 | 5 | 0.0000000031829 |
| Olea europaea | chr15 | 5 | CH_oeu_124 | 3 | 3 | 0.0000000427407 |
| Prunus persica | Pp08 | 5 | CH_ppe_861 | 2 | 2 | 0.000745962 |
| Populus trichocarpa | Chr10 | 5 | CH_ptr_346 | 3 | 3 | 0.00000028064 |
| Quercus lobata | 11 | 5 | CH_qlo_973 | 3 | 5 | 0.00000139916 |
| Simmondsia chinensis | GWHAASQ00000011 | 5 | CH_sci_475 | 2 | 2 | 0.000510856 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_32 | 14 | 68 | 1.87167e-24 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_35 | 10 | 13 | 1.0639e-23 |
| Solanum pennellii | Spenn-ch08 | 5 | CH_spe_107 | 5 | 7 | 0.000000000016225 |
| Solanum pennellii | Spenn-ch08 | 5 | CH_spe_234 | 4 | 6 | 0.0000000289484 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_452 | 3 | 3 | 0.0000032144 |
| Solanum tuberosum | ST4.03ch12 | 5 | CH_stu_633 | 3 | 6 | 0.0000642275 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_634 | 3 | 6 | 0.0000642275 |
| Trochodendron aralioides | group11 | 5 | CH_tar_303 | 3 | 3 | 0.000000302778 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_275 | 3 | 3 | 0.00000141825 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_276 | 3 | 3 | 0.00000141825 |
| Utricularia gibba | unitig_0 | 5 | CH_ugi_397 | 2 | 2 | 0.000820479 |
| Utricularia gibba | unitig_21 | 5 | CH_ugi_398 | 2 | 2 | 0.000820479 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_816 | 2 | 2 | 0.000929238 |
| Vanilla planifolia | CM028161.1 | 5 | CH_vpl_558 | 2 | 2 | 0.000221664 |
| Anthoceros agrestis | Sc2ySwM_368 | 6 | CH_aag_245 | 3 | 19 | 0.000186861 |
| Actinidia chinensis | Lachesis_group3 | 6 | CH_ach_175 | 3 | 3 | 0.00000161118 |
| Avicennia marina | ScioBoG_102835_HRSCAF_103059 | 6 | CH_ama_244 | 2 | 2 | 0.000862218 |
| Brassica carinata | ChrC05 | 6 | CH_bca_295 | 4 | 4 | 0.000000000922079 |
| Brassica carinata | ChrB02 | 6 | CH_bca_5 | 10 | 11 | 3.22323e-30 |
| Brassica napus | A08 | 6 | CH_bna_1132 | 3 | 12 | 0.000174871 |
| Brassica oleracea | C7 | 6 | CH_bol_165 | 4 | 6 | 0.00000000480699 |
| Brassica oleracea | C8 | 6 | CH_bol_709 | 3 | 12 | 0.000287181 |
| Capsicum annuum | PGAv.1.6.scaffold649 | 6 | CH_can_421 | 3 | 4 | 0.00000491257 |
| Capsicum annuum | PGAv.1.6.scaffold572 | 6 | CH_can_450 | 3 | 5 | 0.0000122783 |
| Corylus avellana | 1 | 6 | CH_cav_383 | 3 | 8 | 0.00000986962 |
| Coffea canephora | chr0 | 6 | CH_ccan_720 | 2 | 4 | 0.000919902 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_191 | 4 | 5 | 0.00000000675992 |
| Carica papaya | supercontig_19 | 6 | CH_cpa_519 | 2 | 2 | 0.000285198 |
| Fragaria x ananassa | Fvb5-3 | 6 | CH_fan_586 | 3 | 5 | 0.00000585333 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_796 | 2 | 2 | 0.000589102 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_247 | 4 | 5 | 0.000000000109057 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_1236 | 2 | 2 | 0.000898311 |
| Malus domestica | Chr17 | 6 | CH_mdo_1259 | 2 | 2 | 0.000379212 |
| Medicago truncatula | chr7 | 6 | CH_mtr_1027 | 3 | 8 | 0.000115565 |
| Medicago truncatula | chr7 | 6 | CH_mtr_412 | 4 | 5 | 0.0000000031829 |
| Olea europaea | chr15 | 6 | CH_oeu_124 | 3 | 3 | 0.0000000427407 |
| Prunus persica | Pp08 | 6 | CH_ppe_861 | 2 | 2 | 0.000745962 |
| Populus trichocarpa | Chr10 | 6 | CH_ptr_346 | 3 | 3 | 0.00000028064 |
| Quercus lobata | 11 | 6 | CH_qlo_973 | 3 | 5 | 0.00000139916 |
| Simmondsia chinensis | GWHAASQ00000011 | 6 | CH_sci_475 | 2 | 2 | 0.000510856 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_32 | 14 | 68 | 1.87167e-24 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_35 | 10 | 13 | 1.0639e-23 |
| Solanum pennellii | Spenn-ch08 | 6 | CH_spe_107 | 5 | 7 | 0.000000000016225 |
| Solanum pennellii | Spenn-ch08 | 6 | CH_spe_234 | 4 | 6 | 0.0000000289484 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_452 | 3 | 3 | 0.0000032144 |
| Solanum tuberosum | ST4.03ch12 | 6 | CH_stu_633 | 3 | 6 | 0.0000642275 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_634 | 3 | 6 | 0.0000642275 |
| Trochodendron aralioides | group11 | 6 | CH_tar_303 | 3 | 3 | 0.000000302778 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_275 | 3 | 3 | 0.00000141825 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_276 | 3 | 3 | 0.00000141825 |
| Utricularia gibba | unitig_0 | 6 | CH_ugi_397 | 2 | 2 | 0.000820479 |
| Utricularia gibba | unitig_21 | 6 | CH_ugi_398 | 2 | 2 | 0.000820479 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_816 | 2 | 2 | 0.000929238 |
| Vanilla planifolia | CM028161.1 | 6 | CH_vpl_558 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |