Functional clusters
Information
- Type InterPro
- Description Protein C2-DOMAIN ABA-RELATED
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_2 | 5 | CH_aly_304 | 3 | 3 | 0.00000143772 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_501 | 2 | 2 | 0.000481193 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 5 | CH_arhy_662 | 4 | 23 | 0.00000217383 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_230 | 3 | 3 | 0.000000203145 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 5 | CH_atr_237 | 3 | 5 | 0.000000378612 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1001 | 3 | 3 | 0.00000730674 |
| Brassica napus | C06 | 5 | CH_bna_1193 | 3 | 9 | 0.00024384 |
| Brassica rapa | A07 | 5 | CH_bra_239 | 3 | 3 | 0.000002256 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 5 | CH_bvu_132 | 4 | 7 | 0.00000000750421 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_415 | 4 | 9 | 0.0000000180265 |
| Cannabis sativa | NC_044376.1 | 5 | CH_cansat_160 | 4 | 8 | 0.00000000748744 |
| Corylus avellana | 11 | 5 | CH_cav_365 | 3 | 7 | 0.00000616928 |
| Capsella rubella | scaffold_2 | 5 | CH_cru_307 | 3 | 3 | 0.00000132315 |
| Eucalyptus grandis | Chr10 | 5 | CH_egr_478 | 4 | 4 | 0.000000000126316 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_10 | 18 | 39 | 6.47609e-43 |
| Fragaria vesca | Fvb1 | 5 | CH_fve_414 | 3 | 4 | 0.00000174885 |
| Hydrangea macrophylla | Hma1.2p1_0832F.1 | 5 | CH_hma_667 | 2 | 2 | 0.000666519 |
| Malus domestica | Chr09 | 5 | CH_mdo_207 | 4 | 4 | 0.0000000000343566 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_254 | 3 | 3 | 0.000000472967 |
| Prunus persica | Pp03 | 5 | CH_ppe_352 | 3 | 3 | 0.000000166944 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_248 | 3 | 3 | 0.000000228572 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_598 | 3 | 4 | 0.0000001907 |
| Trochodendron aralioides | group13 | 5 | CH_tar_915 | 2 | 2 | 0.000600366 |
| Arabidopsis lyrata | scaffold_2 | 6 | CH_aly_304 | 3 | 3 | 0.00000143772 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_501 | 2 | 2 | 0.000481193 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 6 | CH_arhy_662 | 4 | 23 | 0.00000217383 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_230 | 3 | 3 | 0.000000203145 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 6 | CH_atr_237 | 3 | 5 | 0.000000378612 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1001 | 3 | 3 | 0.00000730674 |
| Brassica napus | C06 | 6 | CH_bna_1193 | 3 | 9 | 0.00024384 |
| Brassica rapa | A07 | 6 | CH_bra_239 | 3 | 3 | 0.000002256 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 6 | CH_bvu_132 | 4 | 7 | 0.00000000750421 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_415 | 4 | 9 | 0.0000000180265 |
| Cannabis sativa | NC_044376.1 | 6 | CH_cansat_160 | 4 | 8 | 0.00000000748744 |
| Corylus avellana | 11 | 6 | CH_cav_365 | 3 | 7 | 0.00000616928 |
| Capsella rubella | scaffold_2 | 6 | CH_cru_307 | 3 | 3 | 0.00000132315 |
| Eucalyptus grandis | Chr10 | 6 | CH_egr_478 | 4 | 4 | 0.000000000126316 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_10 | 18 | 39 | 6.47609e-43 |
| Fragaria x ananassa | Fvb1-1 | 6 | CH_fan_472 | 3 | 4 | 0.00000167614 |
| Fragaria x ananassa | Fvb1-3 | 6 | CH_fan_611 | 3 | 6 | 0.00000837878 |
| Fragaria vesca | Fvb1 | 6 | CH_fve_414 | 3 | 4 | 0.00000174885 |
| Hydrangea macrophylla | Hma1.2p1_0832F.1 | 6 | CH_hma_667 | 2 | 2 | 0.000666519 |
| Malus domestica | Chr09 | 6 | CH_mdo_207 | 4 | 4 | 0.0000000000343566 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_254 | 3 | 3 | 0.000000472967 |
| Prunus persica | Pp03 | 6 | CH_ppe_352 | 3 | 3 | 0.000000166944 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_248 | 3 | 3 | 0.000000228572 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_598 | 3 | 4 | 0.0000001907 |
| Trochodendron aralioides | group13 | 6 | CH_tar_915 | 2 | 2 | 0.000600366 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |