Functional clusters
Information
- Type InterPro
- Description Protein WUSCHEL-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Olea europaea | chr10 | 5 | CH_oeu_187 | 3 | 3 | 0.000000940296 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_254 | 15 | 78 | 0.00000000000112693 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_395 | 13 | 77 | 0.00000000093071 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_404 | 13 | 78 | 0.00000000110944 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_409 | 13 | 80 | 0.0000000015647 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_630 | 11 | 72 | 0.000000306655 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_636 | 11 | 73 | 0.00000035869 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_686 | 11 | 78 | 0.000000758661 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_944 | 6 | 15 | 0.0000366755 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_122 | 10 | 13 | 6.27071e-26 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1953 | 3 | 5 | 0.000129946 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_604 | 5 | 6 | 0.0000000000300858 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_865 | 2 | 2 | 0.000667186 |
| Olea europaea | chr10 | 6 | CH_oeu_187 | 3 | 3 | 0.000000940296 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_254 | 15 | 78 | 0.00000000000112693 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_395 | 13 | 77 | 0.00000000093071 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_404 | 13 | 78 | 0.00000000110944 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_409 | 13 | 80 | 0.0000000015647 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_630 | 11 | 72 | 0.000000306655 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_636 | 11 | 73 | 0.00000035869 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_686 | 11 | 78 | 0.000000758661 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_944 | 6 | 15 | 0.0000366755 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_122 | 10 | 13 | 6.27071e-26 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1953 | 3 | 5 | 0.000129946 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_604 | 5 | 6 | 0.0000000000300858 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_865 | 2 | 2 | 0.000667186 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |