Functional clusters

Information

  • Type InterPro
  • Description TPR repeat-containing thioredoxin TTL1-4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 5 CH_acertr_1015 2 2 0.00070497
Amborella trichopoda AmTr_v1.0_scaffold00010 5 CH_atr_231 3 3 0.000000331332
Brassica napus A01 5 CH_bna_691 3 3 0.0000033825
Brassica rapa A01 5 CH_bra_224 3 3 0.00000154824
Camellia sinensis var. sinensis Chr4 5 CH_camsi_1434 2 2 0.000687821
Salvia bowleyana GWHASIU00000005 5 CH_sbo_716 2 2 0.00045498
Simmondsia chinensis GWHAASQ00000023 5 CH_sci_541 2 2 0.000851426
Solanum lycopersicum SL4.0ch10 5 CH_sly_124 6 22 0.000000000000245138
Solanum pennellii Spenn-ch10 5 CH_spe_142 5 22 0.000000000194451
Solanum tuberosum ST4.03ch10 5 CH_stu_50 7 9 1.69456e-20
Acer truncatum chr13 6 CH_acertr_1015 2 2 0.00070497
Amborella trichopoda AmTr_v1.0_scaffold00010 6 CH_atr_231 3 3 0.000000331332
Brassica napus A01 6 CH_bna_691 3 3 0.0000033825
Brassica rapa A01 6 CH_bra_224 3 3 0.00000154824
Camellia sinensis var. sinensis Chr4 6 CH_camsi_1434 2 2 0.000687821
Salvia bowleyana GWHASIU00000005 6 CH_sbo_716 2 2 0.00045498
Simmondsia chinensis GWHAASQ00000023 6 CH_sci_541 2 2 0.000851426
Solanum lycopersicum SL4.0ch10 6 CH_sly_124 6 22 0.000000000000245138
Solanum pennellii Spenn-ch10 6 CH_spe_142 5 22 0.000000000194451
Solanum tuberosum ST4.03ch10 6 CH_stu_50 7 9 1.69456e-20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001