Functional clusters
Information
- Type InterPro
- Description FCS-Like Zinc finger 1/2/3
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Avicennia marina | ScioBoG_102838_HRSCAF_103081 | 5 | CH_ama_16 | 4 | 4 | 0.000000000403875 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_1557 | 2 | 2 | 0.000962949 |
| Capsicum annuum | PGAv.1.6.scaffold422 | 5 | CH_can_725 | 2 | 2 | 0.000247831 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_1287 | 2 | 2 | 0.000351165 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_783 | 2 | 2 | 0.0000485661 |
| Nicotiana tabacum | Nitab4.5_0000506 | 5 | CH_nta_286 | 2 | 2 | 0.000329182 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_319 | 3 | 3 | 0.00000119657 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_83 | 5 | 5 | 0.0000000000000751013 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_567 | 2 | 2 | 0.00015649 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_803 | 2 | 2 | 0.000307472 |
| Zea mays | 5 | 5 | CH_zma_236 | 3 | 3 | 0.00000266676 |
| Zea mays | 4 | 5 | CH_zma_277 | 3 | 4 | 0.0000106639 |
| Zea mays | 2 | 5 | CH_zma_32 | 6 | 6 | 9.73435e-17 |
| Avicennia marina | ScioBoG_102838_HRSCAF_103081 | 6 | CH_ama_16 | 4 | 4 | 0.000000000403875 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_1557 | 2 | 2 | 0.000962949 |
| Capsicum annuum | PGAv.1.6.scaffold422 | 6 | CH_can_725 | 2 | 2 | 0.000247831 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_1287 | 2 | 2 | 0.000351165 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_783 | 2 | 2 | 0.0000485661 |
| Nicotiana tabacum | Nitab4.5_0000506 | 6 | CH_nta_286 | 2 | 2 | 0.000329182 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_319 | 3 | 3 | 0.00000119657 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_83 | 5 | 5 | 0.0000000000000751013 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_567 | 2 | 2 | 0.00015649 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_803 | 2 | 2 | 0.000307472 |
| Zea mays | 5 | 6 | CH_zma_236 | 3 | 3 | 0.00000266676 |
| Zea mays | 4 | 6 | CH_zma_277 | 3 | 4 | 0.0000106639 |
| Zea mays | 2 | 6 | CH_zma_32 | 6 | 6 | 9.73435e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |