Functional clusters

Information

  • Type InterPro
  • Description UDP-glucuronic acid decarboxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00034 5 CH_atr_664 2 2 0.000794407
Cannabis sativa NC_044371.1 5 CH_cansat_317 3 9 0.0000108591
Coffea canephora chr3 5 CH_ccan_413 2 2 0.0000638836
Lupinus albus Lalb_Chr18 5 CH_lal_131 4 4 0.00000000384048
Punica granatum NC_045134.1 5 CH_pgr_625 2 2 0.000750356
Physcomitrium patens Chr10 5 CH_ppa_387 2 2 0.000612726
Pisum sativum chr6LG2 5 CH_psa_750 2 2 0.000782452
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1475 2 2 0.00083717
Sequoiadendron giganteum chr7 5 CH_sgi_2485 2 2 0.000487151
Sequoiadendron giganteum chr7 5 CH_sgi_2486 2 2 0.000487151
Vanilla planifolia CM028150.1 5 CH_vpl_76 6 54 0.000000000585969
Amborella trichopoda AmTr_v1.0_scaffold00034 6 CH_atr_664 2 2 0.000794407
Cannabis sativa NC_044371.1 6 CH_cansat_317 3 9 0.0000108591
Coffea canephora chr3 6 CH_ccan_413 2 2 0.0000638836
Lupinus albus Lalb_Chr18 6 CH_lal_131 4 4 0.00000000384048
Punica granatum NC_045134.1 6 CH_pgr_625 2 2 0.000750356
Physcomitrium patens Chr10 6 CH_ppa_387 2 2 0.000612726
Pisum sativum chr6LG2 6 CH_psa_750 2 2 0.000782452
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1475 2 2 0.00083717
Sequoiadendron giganteum chr7 6 CH_sgi_2485 2 2 0.000487151
Sequoiadendron giganteum chr7 6 CH_sgi_2486 2 2 0.000487151
Vanilla planifolia CM028150.1 6 CH_vpl_76 6 54 0.000000000585969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001