Functional clusters

Information

  • Type InterPro
  • Description ProlycopenC2 and GRAM domain-containing protein At1g03370/At5g50170-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_243 3 3 0.00000002982
Brassica carinata ChrC06 5 CH_bca_1607 2 2 0.000213764
Camellia sinensis var. sinensis Chr15 5 CH_camsi_1334 2 5 0.000458516
Carya illinoinensis Chr10 5 CH_cil_763 2 2 0.000371897
Carica papaya supercontig_27 5 CH_cpa_517 2 2 0.000285198
Chlamydomonas reinhardtii chromosome_10 5 CH_cre_50 3 7 0.000000678985
Lupinus albus Lalb_Chr08 5 CH_lal_721 2 2 0.000524824
Lonicera japonica GWHAAZE00000009 5 CH_lonja_1182 2 2 0.000598874
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1183 2 2 0.000598874
Magnolia biondii Chr14 5 CH_mbi_481 3 4 0.000000495284
Petunia axillaris Peaxi162Scf00073 5 CH_pax_184 3 3 0.0000000742514
Papaver somniferum NC_039359.1 5 CH_pso_1100 2 2 0.000337941
Quercus lobata 10 5 CH_qlo_1488 2 2 0.000154887
Rhododendron simsii chr13 5 CH_rsi_900 2 2 0.000387184
Simmondsia chinensis GWHAASQ00000012 5 CH_sci_410 2 2 0.000255428
Sequoiadendron giganteum chr5 5 CH_sgi_940 3 3 0.0000000142393
Vanilla planifolia JADCNL010000129.1 5 CH_vpl_556 2 2 0.000221664
Acer truncatum chr9 6 CH_acertr_243 3 3 0.00000002982
Brassica carinata ChrC06 6 CH_bca_1607 2 2 0.000213764
Camellia sinensis var. sinensis Chr15 6 CH_camsi_1334 2 5 0.000458516
Carya illinoinensis Chr10 6 CH_cil_763 2 2 0.000371897
Carica papaya supercontig_27 6 CH_cpa_517 2 2 0.000285198
Chlamydomonas reinhardtii chromosome_10 6 CH_cre_50 3 7 0.000000678985
Lupinus albus Lalb_Chr08 6 CH_lal_721 2 2 0.000524824
Lonicera japonica GWHAAZE00000009 6 CH_lonja_1182 2 2 0.000598874
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1183 2 2 0.000598874
Magnolia biondii Chr14 6 CH_mbi_481 3 4 0.000000495284
Petunia axillaris Peaxi162Scf00073 6 CH_pax_184 3 3 0.0000000742514
Papaver somniferum NC_039359.1 6 CH_pso_1100 2 2 0.000337941
Quercus lobata 10 6 CH_qlo_1488 2 2 0.000154887
Rhododendron simsii chr13 6 CH_rsi_900 2 2 0.000387184
Simmondsia chinensis GWHAASQ00000012 6 CH_sci_410 2 2 0.000255428
Sequoiadendron giganteum chr5 6 CH_sgi_940 3 3 0.0000000142393
Vanilla planifolia JADCNL010000129.1 6 CH_vpl_556 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001