Functional clusters

Information

  • Type InterPro
  • Description Aldo-keto reductase family 4C

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 5 CH_aly_263 3 4 0.000000522751
Avicennia marina ScioBoG_25048_HRSCAF_25167 5 CH_ama_111 2 2 0.0000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 5 CH_amhyb_286 2 3 0.000252515
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 5 CH_arhy_204 5 6 0.0000000000000465254
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 5 CH_arhy_648 3 4 0.00000153788
Amborella trichopoda AmTr_v1.0_scaffold00012 5 CH_atr_620 2 5 0.000794313
Brassica oleracea C3 5 CH_bol_842 2 2 0.000686409
Brassica rapa A03 5 CH_bra_603 2 2 0.000901558
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1065 2 2 0.000137564
Cannabis sativa NC_044378.1 5 CH_cansat_501 2 4 0.000393959
Citrus clementina scaffold_6 5 CH_ccl_99 5 6 0.00000000000000203805
Citrullus lanatus CG_Chr04 5 CH_cla_201 2 3 0.0000887115
Capsella rubella scaffold_4 5 CH_cru_271 3 4 0.000000320735
Cucumis sativus L. chr4 5 CH_csa_45 5 5 3.64263e-16
Daucus carota DCARv2_Chr8 5 CH_dca_400 2 2 0.0000637775
Durio zibethinus NW_019167937.1 5 CH_dzi_36 6 9 4.04322e-19
Eucalyptus grandis Chr02 5 CH_egr_467 4 5 0.000000000105253
Erythranthe guttata scaffold_10 5 CH_egut_127 4 4 0.00000000000115831
Eutrema salsugineum scaffold_10 5 CH_esa_90 4 5 0.0000000000331199
Fragaria vesca Fvb6 5 CH_fve_77 5 8 0.00000000000000505881
Gossypium hirsutum A04 5 CH_ghi_302 4 5 0.000000000389757
Gossypium hirsutum D04 5 CH_ghi_303 4 5 0.000000000389757
Glycine max Gm03 5 CH_gma_175 4 6 0.000000000172225
Gossypium raimondii Chr12 5 CH_gra_153 4 5 0.0000000000808926
Hydrangea macrophylla Hma1.2p1_0877F.1 5 CH_hma_505 2 3 0.000333241
Lotus japonicus chr3 5 CH_lja_77 4 5 0.0000000000822712
Lonicera japonica GWHAAZE00000002 5 CH_lonja_464 3 4 0.00000021518
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_284 3 3 0.0000000158526
Malus domestica Chr12 5 CH_mdo_100 5 7 0.00000000000000683962
Manihot esculenta Chromosome08 5 CH_mes_199 4 6 0.000000000358564
Punica granatum NC_045131.1 5 CH_pgr_551 2 2 0.000450214
Punica granatum NC_045127.1 5 CH_pgr_552 2 2 0.000450214
Prunus persica Pp06 5 CH_ppe_121 5 7 0.00000000000000487768
Papaver somniferum NC_039366.1 5 CH_pso_1250 2 4 0.000811015
Papaver somniferum NC_039368.1 5 CH_pso_960 2 2 0.000135176
Populus trichocarpa Chr16 5 CH_ptr_332 3 4 0.000000200443
Phaseolus vulgaris Chr10 5 CH_pvu_21 9 9 1.20497e-30
Salvia bowleyana GWHASIU00000003 5 CH_sbo_641 2 2 0.000272988
Salvia bowleyana GWHASIU00000003 5 CH_sbo_642 2 2 0.000272988
Sechium edule LG14 5 CH_sed_387 2 2 0.000214026
Sequoiadendron giganteum chr9 5 CH_sgi_2617 2 4 0.000876801
Schrenkiella parvula ch4-6 5 CH_spa_131 3 4 0.00000037192
Solanum tuberosum ST4.03ch09 5 CH_stu_578 2 2 0.0000512453
Theobroma cacao Chromosome_5 5 CH_tca_69 5 5 2.15833e-16
Tarenaya hassleriana NW_010962392.1 5 CH_tha_36 4 4 0.00000000000511188
Tripterygium wilfordii NC_052244.1 5 CH_twi_143 3 4 0.0000000186488
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_777 2 2 0.000929238
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_778 2 2 0.000929238
Vitis vinifera chr8 5 CH_vvi_126 4 4 0.00000000000132036
Zea mays 3 5 CH_zma_481 2 2 0.000511313
Zea mays 6 5 CH_zma_482 2 2 0.000511313
Arabidopsis lyrata scaffold_4 6 CH_aly_263 3 4 0.000000522751
Avicennia marina ScioBoG_25048_HRSCAF_25167 6 CH_ama_111 2 2 0.0000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 6 CH_amhyb_286 2 3 0.000252515
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 6 CH_arhy_204 5 6 0.0000000000000465254
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 6 CH_arhy_648 3 4 0.00000153788
Amborella trichopoda AmTr_v1.0_scaffold00012 6 CH_atr_620 2 5 0.000794313
Brassica oleracea C3 6 CH_bol_842 2 2 0.000686409
Brassica rapa A03 6 CH_bra_603 2 2 0.000901558
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1065 2 2 0.000137564
Cannabis sativa NC_044378.1 6 CH_cansat_501 2 4 0.000393959
Citrus clementina scaffold_6 6 CH_ccl_99 5 6 0.00000000000000203805
Citrullus lanatus CG_Chr04 6 CH_cla_201 2 3 0.0000887115
Cucumis melo chr08 6 CH_cme_64 4 4 0.000000000000890758
Capsella rubella scaffold_4 6 CH_cru_271 3 4 0.000000320735
Cucumis sativus L. chr4 6 CH_csa_45 5 5 3.64263e-16
Daucus carota DCARv2_Chr8 6 CH_dca_400 2 2 0.0000637775
Durio zibethinus NW_019167937.1 6 CH_dzi_36 6 9 4.04322e-19
Eucalyptus grandis Chr02 6 CH_egr_467 4 5 0.000000000105253
Erythranthe guttata scaffold_10 6 CH_egut_127 4 4 0.00000000000115831
Eutrema salsugineum scaffold_10 6 CH_esa_90 4 5 0.0000000000331199
Fragaria x ananassa Fvb6-1 6 CH_fan_209 4 9 0.00000000118503
Fragaria x ananassa Fvb6-3 6 CH_fan_496 3 6 0.00000225927
Fragaria vesca Fvb6 6 CH_fve_77 5 8 0.00000000000000505881
Gossypium hirsutum A04 6 CH_ghi_302 4 5 0.000000000389757
Gossypium hirsutum D04 6 CH_ghi_303 4 5 0.000000000389757
Glycine max Gm03 6 CH_gma_175 4 6 0.000000000172225
Gossypium raimondii Chr12 6 CH_gra_153 4 5 0.0000000000808926
Hydrangea macrophylla Hma1.2p1_0877F.1 6 CH_hma_505 2 3 0.000333241
Lotus japonicus chr3 6 CH_lja_77 4 5 0.0000000000822712
Lonicera japonica GWHAAZE00000002 6 CH_lonja_464 3 4 0.00000021518
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_284 3 3 0.0000000158526
Malus domestica Chr12 6 CH_mdo_100 5 7 0.00000000000000683962
Manihot esculenta Chromosome08 6 CH_mes_199 4 6 0.000000000358564
Punica granatum NC_045131.1 6 CH_pgr_551 2 2 0.000450214
Punica granatum NC_045127.1 6 CH_pgr_552 2 2 0.000450214
Prunus persica Pp06 6 CH_ppe_121 5 7 0.00000000000000487768
Papaver somniferum NC_039366.1 6 CH_pso_1250 2 4 0.000811015
Papaver somniferum NC_039368.1 6 CH_pso_960 2 2 0.000135176
Populus trichocarpa Chr16 6 CH_ptr_332 3 4 0.000000200443
Phaseolus vulgaris Chr10 6 CH_pvu_21 9 9 1.20497e-30
Salvia bowleyana GWHASIU00000003 6 CH_sbo_641 2 2 0.000272988
Salvia bowleyana GWHASIU00000003 6 CH_sbo_642 2 2 0.000272988
Sechium edule LG14 6 CH_sed_387 2 2 0.000214026
Sequoiadendron giganteum chr9 6 CH_sgi_2617 2 4 0.000876801
Schrenkiella parvula ch4-6 6 CH_spa_131 3 4 0.00000037192
Solanum tuberosum ST4.03ch09 6 CH_stu_578 2 2 0.0000512453
Theobroma cacao Chromosome_5 6 CH_tca_69 5 5 2.15833e-16
Tarenaya hassleriana NW_010962392.1 6 CH_tha_36 4 4 0.00000000000511188
Tripterygium wilfordii NC_052244.1 6 CH_twi_143 3 4 0.0000000186488
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_777 2 2 0.000929238
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_778 2 2 0.000929238
Vitis vinifera chr8 6 CH_vvi_126 4 4 0.00000000000132036
Zea mays 3 6 CH_zma_481 2 2 0.000511313
Zea mays 6 6 CH_zma_482 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001