Functional clusters
Information
- Type InterPro
- Description Aldo-keto reductase family 4A/B
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group16 | 5 | CH_ach_583 | 2 | 2 | 0.000814819 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_138 | 3 | 3 | 0.0000000964818 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_547 | 2 | 2 | 0.000801989 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 5 | CH_arhy_361 | 4 | 6 | 0.000000000863205 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_495 | 2 | 4 | 0.000257837 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 5 | CH_bvu_401 | 2 | 3 | 0.000248365 |
| Cannabis sativa | NC_044373.1 | 5 | CH_cansat_211 | 3 | 3 | 0.000000129358 |
| Cannabis sativa | NC_044376.1 | 5 | CH_cansat_262 | 3 | 5 | 0.0000012933 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_375 | 3 | 12 | 0.0000378154 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 5 | CH_cqu_392 | 3 | 6 | 0.000000673416 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_331 | 2 | 2 | 0.0000834759 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_226 | 3 | 4 | 0.000000244043 |
| Durio zibethinus | NW_019168048.1 | 5 | CH_dzi_238 | 3 | 3 | 0.000000708928 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_35 | 5 | 5 | 3.0411e-17 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_277 | 6 | 8 | 0.00000000000000346375 |
| Eutrema salsugineum | scaffold_8 | 5 | CH_esa_329 | 2 | 2 | 0.0000761499 |
| Helianthus annuus | HanXRQChr08 | 5 | CH_han_335 | 4 | 16 | 0.0000000047234 |
| Lupinus albus | Lalb_Chr24 | 5 | CH_lal_586 | 2 | 2 | 0.000314895 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_349 | 3 | 3 | 0.00000000537991 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_798 | 2 | 3 | 0.000462586 |
| Medicago truncatula | chr5 | 5 | CH_mtr_566 | 3 | 3 | 0.000000141802 |
| Medicago truncatula | chr4 | 5 | CH_mtr_701 | 3 | 5 | 0.00000141774 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_323 | 3 | 6 | 0.00000146402 |
| Prunus persica | Pp01 | 5 | CH_ppe_423 | 3 | 8 | 0.00000186917 |
| Pisum sativum | chr7LG7 | 5 | CH_psa_723 | 2 | 2 | 0.000782452 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_724 | 2 | 2 | 0.000782452 |
| Papaver somniferum | NC_039367.1 | 5 | CH_pso_926 | 3 | 9 | 0.000098389 |
| Quercus lobata | 3 | 5 | CH_qlo_1064 | 3 | 9 | 0.00000671396 |
| Quercus lobata | 5 | 5 | CH_qlo_1769 | 2 | 2 | 0.000774433 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_489 | 3 | 4 | 0.00000139901 |
| Selenicereus undatus | Scaffold_19641 | 5 | CH_sun_177 | 2 | 2 | 0.0000726639 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_188 | 4 | 5 | 0.00000000020624 |
| Actinidia chinensis | Lachesis_group16 | 6 | CH_ach_583 | 2 | 2 | 0.000814819 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_138 | 3 | 3 | 0.0000000964818 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_547 | 2 | 2 | 0.000801989 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 6 | CH_arhy_361 | 4 | 6 | 0.000000000863205 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_495 | 2 | 4 | 0.000257837 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 6 | CH_bvu_401 | 2 | 3 | 0.000248365 |
| Cannabis sativa | NC_044373.1 | 6 | CH_cansat_211 | 3 | 3 | 0.000000129358 |
| Cannabis sativa | NC_044376.1 | 6 | CH_cansat_262 | 3 | 5 | 0.0000012933 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_375 | 3 | 12 | 0.0000378154 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 6 | CH_cqu_392 | 3 | 6 | 0.000000673416 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_331 | 2 | 2 | 0.0000834759 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_226 | 3 | 4 | 0.000000244043 |
| Durio zibethinus | NW_019168048.1 | 6 | CH_dzi_238 | 3 | 3 | 0.000000708928 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_35 | 5 | 5 | 3.0411e-17 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_277 | 6 | 8 | 0.00000000000000346375 |
| Eutrema salsugineum | scaffold_8 | 6 | CH_esa_329 | 2 | 2 | 0.0000761499 |
| Helianthus annuus | HanXRQChr08 | 6 | CH_han_335 | 4 | 16 | 0.0000000047234 |
| Lupinus albus | Lalb_Chr24 | 6 | CH_lal_586 | 2 | 2 | 0.000314895 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_349 | 3 | 3 | 0.00000000537991 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_798 | 2 | 3 | 0.000462586 |
| Medicago truncatula | chr5 | 6 | CH_mtr_566 | 3 | 3 | 0.000000141802 |
| Medicago truncatula | chr4 | 6 | CH_mtr_701 | 3 | 5 | 0.00000141774 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_323 | 3 | 6 | 0.00000146402 |
| Prunus persica | Pp01 | 6 | CH_ppe_423 | 3 | 8 | 0.00000186917 |
| Pisum sativum | chr7LG7 | 6 | CH_psa_723 | 2 | 2 | 0.000782452 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_724 | 2 | 2 | 0.000782452 |
| Papaver somniferum | NC_039367.1 | 6 | CH_pso_926 | 3 | 9 | 0.000098389 |
| Quercus lobata | 3 | 6 | CH_qlo_1064 | 3 | 9 | 0.00000671396 |
| Quercus lobata | 5 | 6 | CH_qlo_1769 | 2 | 2 | 0.000774433 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_489 | 3 | 4 | 0.00000139901 |
| Selenicereus undatus | Scaffold_19641 | 6 | CH_sun_177 | 2 | 2 | 0.0000726639 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_188 | 4 | 5 | 0.00000000020624 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |