Functional clusters

Information

  • Type InterPro
  • Description Heavy metal-associated isoprenylated plant protein 16/46/47

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_337 3 3 0.00000041748
Acer truncatum chr1 5 CH_acertr_407 3 5 0.0000041734
Actinidia chinensis Lachesis_group19 5 CH_ach_501 2 3 0.000488869
Avicennia marina ScioBoG_19538_HRSCAF_19626 5 CH_ama_27 3 3 0.0000000111518
Aquilegia oxysepala CHR04 5 CH_aox_29 6 11 0.00000000000000723892
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_717 3 7 0.00000564468
Amborella trichopoda AmTr_v1.0_scaffold00061 5 CH_atr_161 3 3 0.00000000946662
Camellia sinensis var. sinensis Chr7 5 CH_camsi_1104 2 2 0.000137564
Coffea canephora chr5 5 CH_ccan_185 3 22 0.000000167586
Citrus clementina scaffold_2 5 CH_ccl_320 3 3 0.000000201881
Carpinus fangiana Cfa06 5 CH_cfa_128 4 4 0.0000000000456165
Carya illinoinensis Chr10 5 CH_cil_260 4 6 0.00000000530241
Carya illinoinensis Chr09 5 CH_cil_414 3 3 0.00000126786
Daucus carota DCARv2_Chr5 5 CH_dca_297 3 4 0.00000292816
Davidia involucrata GWHABJS00000013 5 CH_din_319 3 4 0.00000126049
Durio zibethinus NW_019168270.1 5 CH_dzi_511 4 66 0.000385913
Durio zibethinus NW_019167893.1 5 CH_dzi_72 5 6 0.000000000000907005
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_183 3 3 0.00000000302034
Eucalyptus grandis Chr11 5 CH_egr_356 5 6 0.000000000000418182
Eucalyptus grandis Chr01 5 CH_egr_540 4 5 0.0000000014884
Erythranthe guttata scaffold_13 5 CH_egut_637 3 26 0.000412445
Fragaria vesca Fvb3 5 CH_fve_21 8 8 1.28054e-25
Gossypium hirsutum A04 5 CH_ghi_331 6 65 0.000000000967897
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_29 8 11 2.21784e-24
Magnolia biondii Chr14 5 CH_mbi_3 18 70 7.05841e-42
Magnolia biondii Chr16 5 CH_mbi_625 3 3 0.00000716108
Malus domestica Chr03 5 CH_mdo_414 4 11 0.0000000385601
Manihot esculenta Chromosome13 5 CH_mes_117 5 5 0.0000000000000481835
Medicago truncatula chr3 5 CH_mtr_617 3 4 0.000000354476
Nelumbo nucifera chr7 5 CH_nnu_480 3 23 0.000215316
Olea europaea chr6 5 CH_oeu_52 5 12 0.0000000000121427
Oryza sativa ssp. japonica chr04 5 CH_osa_786 2 3 0.000950562
Petunia axillaris Peaxi162Scf00111 5 CH_pax_92 4 5 0.0000000000783584
Prunus persica Pp06 5 CH_ppe_57 8 10 1.17273e-21
Populus trichocarpa Chr06 5 CH_ptr_374 3 3 0.000000826885
Populus trichocarpa Chr09 5 CH_ptr_427 3 4 0.00000330687
Quercus lobata 4 5 CH_qlo_144 9 11 2.78751e-21
Quercus lobata 4 5 CH_qlo_331 6 6 0.0000000000000582781
Quercus lobata 8 5 CH_qlo_40 14 19 2.62971e-34
Quercus lobata 5 5 CH_qlo_758 4 4 0.0000000560501
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_385 4 6 0.000000000598606
Salvia bowleyana GWHASIU00000004 5 CH_sbo_282 5 57 0.0000000617391
Simmondsia chinensis GWHAASQ00000011 5 CH_sci_320 2 2 0.0000851426
Solanum lycopersicum SL4.0ch07 5 CH_sly_161 4 4 0.0000000000424659
Solanum pennellii Spenn-ch07 5 CH_spe_864 2 2 0.000667186
Solanum tuberosum ST4.03ch07 5 CH_stu_456 3 5 0.00000330801
Trochodendron aralioides group3 5 CH_tar_982 2 2 0.000900549
Trochodendron aralioides group0 5 CH_tar_983 2 2 0.000900549
Theobroma cacao Chromosome_7 5 CH_tca_172 4 4 0.0000000000825063
Tripterygium wilfordii NC_052237.1 5 CH_twi_157 3 3 0.0000000466234
Utricularia gibba unitig_46 5 CH_ugi_358 2 3 0.000738381
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_8 8 8 8.48862e-25
Vigna mungo CM024073.1 5 CH_vmu_136 3 4 0.0000000250499
Vitis vinifera chr19 5 CH_vvi_424 3 6 0.00000971487
Zea mays 2 5 CH_zma_108 4 9 0.00000000176793
Acer truncatum chr6 6 CH_acertr_337 3 3 0.00000041748
Acer truncatum chr1 6 CH_acertr_407 3 5 0.0000041734
Actinidia chinensis Lachesis_group19 6 CH_ach_501 2 3 0.000488869
Avicennia marina ScioBoG_19538_HRSCAF_19626 6 CH_ama_27 3 3 0.0000000111518
Aquilegia oxysepala CHR04 6 CH_aox_29 6 11 0.00000000000000723892
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_717 3 7 0.00000564468
Amborella trichopoda AmTr_v1.0_scaffold00061 6 CH_atr_161 3 3 0.00000000946662
Camellia sinensis var. sinensis Chr7 6 CH_camsi_1104 2 2 0.000137564
Coffea canephora chr5 6 CH_ccan_185 3 22 0.000000167586
Citrus clementina scaffold_2 6 CH_ccl_320 3 3 0.000000201881
Carpinus fangiana Cfa06 6 CH_cfa_128 4 4 0.0000000000456165
Carya illinoinensis Chr10 6 CH_cil_260 4 6 0.00000000530241
Carya illinoinensis Chr09 6 CH_cil_414 3 3 0.00000126786
Daucus carota DCARv2_Chr5 6 CH_dca_297 3 4 0.00000292816
Davidia involucrata GWHABJS00000013 6 CH_din_319 3 4 0.00000126049
Durio zibethinus NW_019168270.1 6 CH_dzi_511 4 66 0.000385913
Durio zibethinus NW_019167893.1 6 CH_dzi_72 5 6 0.000000000000907005
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_183 3 3 0.00000000302034
Eucalyptus grandis Chr11 6 CH_egr_356 5 6 0.000000000000418182
Eucalyptus grandis Chr01 6 CH_egr_540 4 5 0.0000000014884
Erythranthe guttata scaffold_13 6 CH_egut_637 3 26 0.000412445
Fragaria x ananassa Fvb3-3 6 CH_fan_471 3 4 0.00000167614
Fragaria vesca Fvb3 6 CH_fve_21 8 8 1.28054e-25
Gossypium hirsutum A04 6 CH_ghi_331 6 65 0.000000000967897
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_29 8 11 2.21784e-24
Magnolia biondii Chr14 6 CH_mbi_3 18 70 7.05841e-42
Magnolia biondii Chr16 6 CH_mbi_625 3 3 0.00000716108
Malus domestica Chr03 6 CH_mdo_414 4 11 0.0000000385601
Manihot esculenta Chromosome13 6 CH_mes_117 5 5 0.0000000000000481835
Medicago truncatula chr3 6 CH_mtr_617 3 4 0.000000354476
Nelumbo nucifera chr7 6 CH_nnu_480 3 23 0.000215316
Olea europaea chr6 6 CH_oeu_52 5 12 0.0000000000121427
Oryza sativa ssp. japonica chr04 6 CH_osa_786 2 3 0.000950562
Petunia axillaris Peaxi162Scf00111 6 CH_pax_92 4 5 0.0000000000783584
Prunus persica Pp06 6 CH_ppe_57 8 10 1.17273e-21
Populus trichocarpa Chr06 6 CH_ptr_374 3 3 0.000000826885
Populus trichocarpa Chr09 6 CH_ptr_427 3 4 0.00000330687
Quercus lobata 4 6 CH_qlo_144 9 11 2.78751e-21
Quercus lobata 4 6 CH_qlo_331 6 6 0.0000000000000582781
Quercus lobata 8 6 CH_qlo_40 14 19 2.62971e-34
Quercus lobata 5 6 CH_qlo_758 4 4 0.0000000560501
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_385 4 6 0.000000000598606
Salvia bowleyana GWHASIU00000004 6 CH_sbo_282 5 57 0.0000000617391
Simmondsia chinensis GWHAASQ00000011 6 CH_sci_320 2 2 0.0000851426
Solanum lycopersicum SL4.0ch07 6 CH_sly_161 4 4 0.0000000000424659
Solanum pennellii Spenn-ch07 6 CH_spe_864 2 2 0.000667186
Solanum tuberosum ST4.03ch07 6 CH_stu_456 3 5 0.00000330801
Trochodendron aralioides group3 6 CH_tar_982 2 2 0.000900549
Trochodendron aralioides group0 6 CH_tar_983 2 2 0.000900549
Theobroma cacao Chromosome_7 6 CH_tca_172 4 4 0.0000000000825063
Tripterygium wilfordii NC_052237.1 6 CH_twi_157 3 3 0.0000000466234
Utricularia gibba unitig_46 6 CH_ugi_358 2 3 0.000738381
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_8 8 8 8.48862e-25
Vigna mungo CM024073.1 6 CH_vmu_136 3 4 0.0000000250499
Vitis vinifera chr19 6 CH_vvi_424 3 6 0.00000971487
Zea mays 2 6 CH_zma_108 4 9 0.00000000176793

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001