Functional clusters

Information

  • Type InterPro
  • Description Transcription factor BIM1/2/3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_16 5 CH_amhyb_482 2 2 0.000841751
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1556 2 2 0.000962949
Corylus avellana 5 5 CH_cav_744 2 2 0.000460017
Chenopodium quinoa C_Quinoa_Scaffold_2579 5 CH_cqu_509 3 6 0.00000565549
Sapria himalayana scaffold32_6892495 5 CH_shi_347 2 2 0.0000571804
Trochodendron aralioides group12 5 CH_tar_913 2 2 0.000600366
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_732 2 2 0.000557543
Amaranthus hybridus AmaHy_arrow1_Scaffold_16 6 CH_amhyb_482 2 2 0.000841751
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1556 2 2 0.000962949
Corylus avellana 5 6 CH_cav_744 2 2 0.000460017
Chenopodium quinoa C_Quinoa_Scaffold_2579 6 CH_cqu_509 3 6 0.00000565549
Sapria himalayana scaffold32_6892495 6 CH_shi_347 2 2 0.0000571804
Trochodendron aralioides group12 6 CH_tar_913 2 2 0.000600366
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_732 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001