Functional clusters

Information

  • Type InterPro
  • Description Arabinosyltransferase RRA1/2/3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 5 CH_aly_549 2 2 0.000198013
Arabidopsis thaliana Chr1 5 CH_ath_431 2 2 0.0000859476
Brassica carinata ChrC07 5 CH_bca_1823 2 2 0.000448905
Chara braunii BFEA01000112 5 CH_cbr_204 2 2 0.0000719269
Capsella rubella scaffold_2 5 CH_cru_270 3 5 0.000000320723
Eucalyptus grandis Chr09 5 CH_egr_648 3 3 0.0000000205534
Malus domestica Chr05 5 CH_mdo_1258 2 2 0.000379212
Medicago truncatula chr4 5 CH_mtr_123 6 12 1.70384e-17
Punica granatum NC_045133.1 5 CH_pgr_436 2 2 0.0000750356
Quercus lobata CM012294 5 CH_qlo_1609 2 2 0.000309773
Tripterygium wilfordii NC_052233.1 5 CH_twi_79 4 5 0.0000000000389886
Arabidopsis lyrata scaffold_2 6 CH_aly_549 2 2 0.000198013
Arabidopsis thaliana Chr1 6 CH_ath_431 2 2 0.0000859476
Brassica carinata ChrC07 6 CH_bca_1823 2 2 0.000448905
Chara braunii BFEA01000112 6 CH_cbr_204 2 2 0.0000719269
Capsella rubella scaffold_2 6 CH_cru_270 3 5 0.000000320723
Eucalyptus grandis Chr09 6 CH_egr_648 3 3 0.0000000205534
Malus domestica Chr05 6 CH_mdo_1258 2 2 0.000379212
Medicago truncatula chr4 6 CH_mtr_123 6 12 1.70384e-17
Punica granatum NC_045133.1 6 CH_pgr_436 2 2 0.0000750356
Quercus lobata CM012294 6 CH_qlo_1609 2 2 0.000309773
Tripterygium wilfordii NC_052233.1 6 CH_twi_79 4 5 0.0000000000389886

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001