Functional clusters

Information

  • Type InterPro
  • Description RING-H2 finger protein ATL67/ATL68/ATL70

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 5 CH_bca_1637 3 19 0.000301688
Brassica oleracea C3 5 CH_bol_916 2 3 0.000980536
Lupinus albus Lalb_Chr19 5 CH_lal_548 2 2 0.000157447
Lotus japonicus chr1 5 CH_lja_478 2 2 0.000214523
Magnolia biondii Chr17 5 CH_mbi_243 4 11 0.000000000566896
Medicago truncatula chr7 5 CH_mtr_1355 2 2 0.000616295
Phaseolus vulgaris Chr08 5 CH_pvu_630 2 2 0.000440836
Salvia bowleyana GWHASIU00000003 5 CH_sbo_681 2 3 0.000409466
Vigna mungo CM024070.1 5 CH_vmu_471 2 2 0.000193842
Vanilla planifolia CM028151.1 5 CH_vpl_677 2 3 0.000664951
Brassica carinata ChrC07 6 CH_bca_1637 3 19 0.000301688
Brassica oleracea C3 6 CH_bol_916 2 3 0.000980536
Lupinus albus Lalb_Chr19 6 CH_lal_548 2 2 0.000157447
Lotus japonicus chr1 6 CH_lja_478 2 2 0.000214523
Magnolia biondii Chr17 6 CH_mbi_243 4 11 0.000000000566896
Medicago truncatula chr7 6 CH_mtr_1355 2 2 0.000616295
Phaseolus vulgaris Chr08 6 CH_pvu_630 2 2 0.000440836
Salvia bowleyana GWHASIU00000003 6 CH_sbo_681 2 3 0.000409466
Vigna mungo CM024070.1 6 CH_vmu_471 2 2 0.000193842
Vanilla planifolia CM028151.1 6 CH_vpl_677 2 3 0.000664951

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001