Functional clusters
Information
- Type InterPro
- Description U3 snoRNP protein/Ribosome production factor 1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_954 | 2 | 2 | 0.000179662 |
| Petunia axillaris | Peaxi162Scf00004 | 5 | CH_pax_326 | 3 | 10 | 0.00000890468 |
| Physcomitrium patens | Chr25 | 5 | CH_ppa_36 | 3 | 3 | 0.0000000225267 |
| Prunus persica | Pp08 | 5 | CH_ppe_535 | 3 | 9 | 0.0000245188 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_334 | 7 | 72 | 0.000000000053249 |
| Sechium edule | LG11 | 5 | CH_sed_414 | 2 | 2 | 0.000214026 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_651 | 3 | 31 | 0.0000927806 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_954 | 2 | 2 | 0.000179662 |
| Petunia axillaris | Peaxi162Scf00004 | 6 | CH_pax_326 | 3 | 10 | 0.00000890468 |
| Physcomitrium patens | Chr25 | 6 | CH_ppa_36 | 3 | 3 | 0.0000000225267 |
| Prunus persica | Pp08 | 6 | CH_ppe_535 | 3 | 9 | 0.0000245188 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_334 | 7 | 72 | 0.000000000053249 |
| Sechium edule | LG11 | 6 | CH_sed_414 | 2 | 2 | 0.000214026 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_651 | 3 | 31 | 0.0000927806 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |