Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase SPL2-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 5 CH_acertr_640 2 2 0.000070497
Actinidia chinensis Lachesis_group1 5 CH_ach_396 2 2 0.000162964
Camellia sinensis var. sinensis Chr15 5 CH_camsi_394 3 4 0.0000000126159
Davidia involucrata GWHABJS00000019 5 CH_din_473 2 2 0.0000500125
Helianthus annuus HanXRQChr12 5 CH_han_413 3 6 0.0000000447964
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_619 2 2 0.0000514007
Malus domestica Chr09 5 CH_mdo_360 3 3 0.00000000862825
Olea europaea scaffold188 5 CH_oeu_486 2 2 0.000160137
Papaver somniferum NW_020618825.1 5 CH_pso_1043 2 2 0.000225294
Papaver somniferum NW_020631041.1 5 CH_pso_367 3 3 0.00000000761368
Trochodendron aralioides group9 5 CH_tar_546 2 2 0.0000600366
Acer truncatum chr1 6 CH_acertr_640 2 2 0.000070497
Actinidia chinensis Lachesis_group1 6 CH_ach_396 2 2 0.000162964
Camellia sinensis var. sinensis Chr15 6 CH_camsi_394 3 4 0.0000000126159
Davidia involucrata GWHABJS00000019 6 CH_din_473 2 2 0.0000500125
Helianthus annuus HanXRQChr12 6 CH_han_413 3 6 0.0000000447964
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_619 2 2 0.0000514007
Malus domestica Chr09 6 CH_mdo_360 3 3 0.00000000862825
Olea europaea scaffold188 6 CH_oeu_486 2 2 0.000160137
Papaver somniferum NW_020618825.1 6 CH_pso_1043 2 2 0.000225294
Papaver somniferum NW_020631041.1 6 CH_pso_367 3 3 0.00000000761368
Trochodendron aralioides group9 6 CH_tar_546 2 2 0.0000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001