Functional clusters
Information
- Type InterPro
- Description Ent-kaurene oxidase, chloroplastic
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group7 | 5 | CH_ach_77 | 3 | 3 | 0.0000000177053 |
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_422 | 2 | 2 | 0.0000660044 |
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_195 | 2 | 2 | 0.0000778301 |
| Citrus clementina | scaffold_5 | 5 | CH_ccl_294 | 3 | 5 | 0.000000100932 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_204 | 3 | 3 | 0.000000122031 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_263 | 3 | 5 | 0.00000122006 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_239 | 3 | 4 | 0.0000000483236 |
| Hydrangea macrophylla | Hma1.2p1_0023F.1 | 5 | CH_hma_519 | 2 | 2 | 0.000333259 |
| Lotus japonicus | chr3 | 5 | CH_lja_53 | 4 | 4 | 0.00000000000109705 |
| Malus domestica | Chr08 | 5 | CH_mdo_1357 | 2 | 3 | 0.000682551 |
| Marchantia polymorpha | scaffold_130 | 5 | CH_mpo_179 | 2 | 2 | 0.000331327 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_204 | 3 | 4 | 0.000000139207 |
| Oryza sativa ssp. japonica | chr06 | 5 | CH_osa_45 | 6 | 10 | 1.94153e-18 |
| Physcomitrium patens | Chr20 | 5 | CH_ppa_127 | 2 | 2 | 0.0000612726 |
| Rhododendron simsii | chr07 | 5 | CH_rsi_180 | 4 | 4 | 0.000000000000806236 |
| Striga asiatica | scaffold14 | 5 | CH_sas_37 | 3 | 3 | 0.0000000234661 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_162 | 5 | 15 | 0.00000000000540115 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_77 | 9 | 10 | 4.49895e-30 |
| Utricularia gibba | unitig_26 | 5 | CH_ugi_109 | 2 | 2 | 0.0000820479 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_75 | 4 | 4 | 0.00000000000240748 |
| Zea mays | 9 | 5 | CH_zma_326 | 2 | 2 | 0.0000511313 |
| Actinidia chinensis | Lachesis_group7 | 6 | CH_ach_77 | 3 | 3 | 0.0000000177053 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_422 | 2 | 2 | 0.0000660044 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_195 | 2 | 2 | 0.0000778301 |
| Citrus clementina | scaffold_5 | 6 | CH_ccl_294 | 3 | 5 | 0.000000100932 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_204 | 3 | 3 | 0.000000122031 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_263 | 3 | 5 | 0.00000122006 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_239 | 3 | 4 | 0.0000000483236 |
| Hydrangea macrophylla | Hma1.2p1_0023F.1 | 6 | CH_hma_519 | 2 | 2 | 0.000333259 |
| Lotus japonicus | chr3 | 6 | CH_lja_53 | 4 | 4 | 0.00000000000109705 |
| Malus domestica | Chr08 | 6 | CH_mdo_1357 | 2 | 3 | 0.000682551 |
| Marchantia polymorpha | scaffold_130 | 6 | CH_mpo_179 | 2 | 2 | 0.000331327 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_204 | 3 | 4 | 0.000000139207 |
| Oryza sativa ssp. japonica | chr06 | 6 | CH_osa_45 | 6 | 10 | 1.94153e-18 |
| Physcomitrium patens | Chr20 | 6 | CH_ppa_127 | 2 | 2 | 0.0000612726 |
| Rhododendron simsii | chr07 | 6 | CH_rsi_180 | 4 | 4 | 0.000000000000806236 |
| Striga asiatica | scaffold14 | 6 | CH_sas_37 | 3 | 3 | 0.0000000234661 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_162 | 5 | 15 | 0.00000000000540115 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_77 | 9 | 10 | 4.49895e-30 |
| Utricularia gibba | unitig_26 | 6 | CH_ugi_109 | 2 | 2 | 0.0000820479 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_75 | 4 | 4 | 0.00000000000240748 |
| Zea mays | 9 | 6 | CH_zma_326 | 2 | 2 | 0.0000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |