Functional clusters
Information
- Type InterPro
- Description Protein SWEETIE
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 5 | CH_atr_419 | 2 | 3 | 0.0000794407 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_35 | 7 | 8 | 5.85848e-24 |
| Capsicum annuum | PGAv.1.6.scaffold625 | 5 | CH_can_591 | 2 | 2 | 0.0000826105 |
| Cicer arietinum L. | Ca_LG2_v3 | 5 | CH_car_311 | 2 | 2 | 0.00023349 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_562 | 2 | 2 | 0.0000820311 |
| Ceratophyllum demersum | 1 | 5 | CH_cde_55 | 3 | 3 | 0.00000000935703 |
| Carya illinoinensis | Chr04 | 5 | CH_cil_595 | 2 | 2 | 0.0000619828 |
| Citrullus lanatus | CG_Chr11 | 5 | CH_cla_234 | 2 | 2 | 0.0000887115 |
| Carica papaya | supercontig_179 | 5 | CH_cpa_40 | 4 | 5 | 0.0000000000128887 |
| Davidia involucrata | GWHABJS00000014 | 5 | CH_din_595 | 2 | 2 | 0.000150038 |
| Gossypium raimondii | Chr01 | 5 | CH_gra_555 | 2 | 4 | 0.000321647 |
| Hydrangea macrophylla | Hma1.2p1_0136F.1 | 5 | CH_hma_468 | 2 | 2 | 0.000111086 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_796 | 2 | 2 | 0.0000598874 |
| Oryza sativa ssp. japonica | chr06 | 5 | CH_osa_565 | 2 | 3 | 0.000158433 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1295 | 2 | 2 | 0.0000516289 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1342 | 2 | 2 | 0.000398653 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_829 | 3 | 3 | 0.00000000355983 |
| Selenicereus undatus | Scaffold_33677 | 5 | CH_sun_214 | 2 | 2 | 0.0000726639 |
| Utricularia gibba | unitig_899 | 5 | CH_ugi_201 | 2 | 2 | 0.0000820479 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_443 | 2 | 2 | 0.000073888 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 6 | CH_atr_419 | 2 | 3 | 0.0000794407 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_35 | 7 | 8 | 5.85848e-24 |
| Capsicum annuum | PGAv.1.6.scaffold625 | 6 | CH_can_591 | 2 | 2 | 0.0000826105 |
| Cicer arietinum L. | Ca_LG2_v3 | 6 | CH_car_311 | 2 | 2 | 0.00023349 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_562 | 2 | 2 | 0.0000820311 |
| Ceratophyllum demersum | 1 | 6 | CH_cde_55 | 3 | 3 | 0.00000000935703 |
| Carya illinoinensis | Chr04 | 6 | CH_cil_595 | 2 | 2 | 0.0000619828 |
| Citrullus lanatus | CG_Chr11 | 6 | CH_cla_234 | 2 | 2 | 0.0000887115 |
| Carica papaya | supercontig_179 | 6 | CH_cpa_40 | 4 | 5 | 0.0000000000128887 |
| Davidia involucrata | GWHABJS00000014 | 6 | CH_din_595 | 2 | 2 | 0.000150038 |
| Gossypium raimondii | Chr01 | 6 | CH_gra_555 | 2 | 4 | 0.000321647 |
| Hydrangea macrophylla | Hma1.2p1_0136F.1 | 6 | CH_hma_468 | 2 | 2 | 0.000111086 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_796 | 2 | 2 | 0.0000598874 |
| Oryza sativa ssp. japonica | chr06 | 6 | CH_osa_565 | 2 | 3 | 0.000158433 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1295 | 2 | 2 | 0.0000516289 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1342 | 2 | 2 | 0.000398653 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_829 | 3 | 3 | 0.00000000355983 |
| Selenicereus undatus | Scaffold_33677 | 6 | CH_sun_214 | 2 | 2 | 0.0000726639 |
| Utricularia gibba | unitig_899 | 6 | CH_ugi_201 | 2 | 2 | 0.0000820479 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_443 | 2 | 2 | 0.000073888 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |