Functional clusters
Information
- Type InterPro
- Description EDS1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_454 | 2 | 2 | 0.0000660044 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_446 | 3 | 3 | 0.0000000268895 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 5 | CH_arhy_489 | 3 | 4 | 0.000000107553 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_380 | 2 | 2 | 0.0000286492 |
| Amborella trichopoda | AmTr_v1.0_scaffold00074 | 5 | CH_atr_418 | 2 | 2 | 0.0000794407 |
| Brassica napus | A01 | 5 | CH_bna_1319 | 2 | 2 | 0.000389795 |
| Brassica napus | C01 | 5 | CH_bna_429 | 3 | 4 | 0.0000000723504 |
| Brassica oleracea | C1 | 5 | CH_bol_619 | 2 | 2 | 0.0000980584 |
| Brassica rapa | A01 | 5 | CH_bra_480 | 2 | 2 | 0.000257588 |
| Corylus avellana | 4 | 5 | CH_cav_546 | 2 | 2 | 0.0000766695 |
| Citrus clementina | scaffold_5 | 5 | CH_ccl_356 | 3 | 6 | 0.000000807351 |
| Carpinus fangiana | Cfa08 | 5 | CH_cfa_199 | 3 | 4 | 0.0000000344144 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_525 | 2 | 2 | 0.0000691204 |
| Carya illinoinensis | Chr11 | 5 | CH_cil_95 | 5 | 5 | 6.64322e-16 |
| Daucus carota | DCARv2_Chr7 | 5 | CH_dca_705 | 2 | 2 | 0.000637775 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_173 | 6 | 7 | 1.08191e-19 |
| Glycine max | Gm06 | 5 | CH_gma_264 | 3 | 3 | 0.00000000864398 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_388 | 3 | 3 | 0.0000000223995 |
| Lotus japonicus | chr1 | 5 | CH_lja_417 | 2 | 2 | 0.0000715077 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_716 | 2 | 2 | 0.000154202 |
| Malus domestica | Chr14 | 5 | CH_mdo_1257 | 2 | 2 | 0.000379212 |
| Malus domestica | Chr06 | 5 | CH_mdo_395 | 3 | 3 | 0.0000000215706 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_435 | 2 | 2 | 0.0000750356 |
| Prunus persica | Pp05 | 5 | CH_ppe_307 | 3 | 4 | 0.0000000333876 |
| Populus trichocarpa | Chr12 | 5 | CH_ptr_633 | 2 | 2 | 0.0001734 |
| Phaseolus vulgaris | Chr09 | 5 | CH_pvu_471 | 2 | 2 | 0.0000734727 |
| Quercus lobata | 10 | 5 | CH_qlo_189 | 6 | 9 | 6.93433e-19 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_702 | 2 | 2 | 0.0000645307 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_544 | 3 | 65 | 0.000135442 |
| Sechium edule | LG08 | 5 | CH_sed_331 | 2 | 2 | 0.0000713419 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_252 | 6 | 6 | 5.70532e-18 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_752 | 4 | 6 | 0.00000000257445 |
| Trochodendron aralioides | group8 | 5 | CH_tar_202 | 3 | 3 | 0.000000021627 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_500 | 2 | 2 | 0.0000929238 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_367 | 2 | 2 | 0.0000646141 |
| Vitis vinifera | chr17 | 5 | CH_vvi_90 | 5 | 6 | 0.00000000000000150657 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_454 | 2 | 2 | 0.0000660044 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_446 | 3 | 3 | 0.0000000268895 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 6 | CH_arhy_489 | 3 | 4 | 0.000000107553 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_380 | 2 | 2 | 0.0000286492 |
| Amborella trichopoda | AmTr_v1.0_scaffold00074 | 6 | CH_atr_418 | 2 | 2 | 0.0000794407 |
| Brassica napus | A01 | 6 | CH_bna_1319 | 2 | 2 | 0.000389795 |
| Brassica napus | C01 | 6 | CH_bna_429 | 3 | 4 | 0.0000000723504 |
| Brassica oleracea | C1 | 6 | CH_bol_619 | 2 | 2 | 0.0000980584 |
| Brassica rapa | A01 | 6 | CH_bra_480 | 2 | 2 | 0.000257588 |
| Corylus avellana | 4 | 6 | CH_cav_546 | 2 | 2 | 0.0000766695 |
| Citrus clementina | scaffold_5 | 6 | CH_ccl_356 | 3 | 6 | 0.000000807351 |
| Carpinus fangiana | Cfa08 | 6 | CH_cfa_199 | 3 | 4 | 0.0000000344144 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_525 | 2 | 2 | 0.0000691204 |
| Carya illinoinensis | Chr11 | 6 | CH_cil_95 | 5 | 5 | 6.64322e-16 |
| Daucus carota | DCARv2_Chr7 | 6 | CH_dca_705 | 2 | 2 | 0.000637775 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_173 | 6 | 7 | 1.08191e-19 |
| Glycine max | Gm06 | 6 | CH_gma_264 | 3 | 3 | 0.00000000864398 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_388 | 3 | 3 | 0.0000000223995 |
| Lotus japonicus | chr1 | 6 | CH_lja_417 | 2 | 2 | 0.0000715077 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_716 | 2 | 2 | 0.000154202 |
| Malus domestica | Chr14 | 6 | CH_mdo_1257 | 2 | 2 | 0.000379212 |
| Malus domestica | Chr06 | 6 | CH_mdo_395 | 3 | 3 | 0.0000000215706 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_435 | 2 | 2 | 0.0000750356 |
| Prunus persica | Pp05 | 6 | CH_ppe_307 | 3 | 4 | 0.0000000333876 |
| Populus trichocarpa | Chr12 | 6 | CH_ptr_633 | 2 | 2 | 0.0001734 |
| Phaseolus vulgaris | Chr09 | 6 | CH_pvu_471 | 2 | 2 | 0.0000734727 |
| Quercus lobata | 10 | 6 | CH_qlo_189 | 6 | 9 | 6.93433e-19 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_702 | 2 | 2 | 0.0000645307 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_544 | 3 | 65 | 0.000135442 |
| Sechium edule | LG08 | 6 | CH_sed_331 | 2 | 2 | 0.0000713419 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_252 | 6 | 6 | 5.70532e-18 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_752 | 4 | 6 | 0.00000000257445 |
| Trochodendron aralioides | group8 | 6 | CH_tar_202 | 3 | 3 | 0.000000021627 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_500 | 2 | 2 | 0.0000929238 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_367 | 2 | 2 | 0.0000646141 |
| Vitis vinifera | chr17 | 6 | CH_vvi_90 | 5 | 6 | 0.00000000000000150657 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |