Functional clusters

Information

  • Type InterPro
  • Description LETM1/MDM38-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 5 CH_acertr_349 3 3 0.00000062622
Acer truncatum chr10 5 CH_acertr_350 3 3 0.00000062622
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 5 CH_amhyb_481 2 2 0.000841751
Camellia sinensis var. sinensis Chr4 5 CH_camsi_649 3 5 0.00000110372
Corylus avellana 10 5 CH_cav_837 2 2 0.000766695
Carica papaya supercontig_104 5 CH_cpa_597 2 2 0.000570396
Pisum sativum chr6LG2 5 CH_psa_694 2 2 0.000521635
Salix brachista GWHAAZH00000016 5 CH_sbr_370 3 5 0.00000714478
Simmondsia chinensis GWHAASQ00000002 5 CH_sci_409 2 2 0.000255428
Sapria himalayana scaffold1_25991295 5 CH_shi_536 2 5 0.000571755
Trochodendron aralioides group9 5 CH_tar_910 2 2 0.000600366
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_630 2 2 0.000227092
Vanilla planifolia CM028153.1 5 CH_vpl_50 5 14 0.00000000000939185
Acer truncatum chr5 6 CH_acertr_349 3 3 0.00000062622
Acer truncatum chr10 6 CH_acertr_350 3 3 0.00000062622
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 6 CH_amhyb_481 2 2 0.000841751
Camellia sinensis var. sinensis Chr4 6 CH_camsi_649 3 5 0.00000110372
Corylus avellana 10 6 CH_cav_837 2 2 0.000766695
Carica papaya supercontig_104 6 CH_cpa_597 2 2 0.000570396
Pisum sativum chr6LG2 6 CH_psa_694 2 2 0.000521635
Salix brachista GWHAAZH00000016 6 CH_sbr_370 3 5 0.00000714478
Simmondsia chinensis GWHAASQ00000002 6 CH_sci_409 2 2 0.000255428
Sapria himalayana scaffold1_25991295 6 CH_shi_536 2 5 0.000571755
Trochodendron aralioides group9 6 CH_tar_910 2 2 0.000600366
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_630 2 2 0.000227092
Vanilla planifolia CM028153.1 6 CH_vpl_50 5 14 0.00000000000939185

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001