Functional clusters
Information
- Type InterPro
- Description Glycosyltransferase BC10-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_25 | 5 | 5 | 0.00000000000000653601 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 5 | CH_arhy_831 | 3 | 3 | 0.0000218007 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1412 | 3 | 4 | 0.000125397 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1018 | 4 | 26 | 0.000117219 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_1156 | 3 | 6 | 0.000255735 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_700 | 4 | 11 | 0.00000260692 |
| Cicer arietinum L. | Ca_LG4_v3 | 5 | CH_car_157 | 3 | 4 | 0.0000132254 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_409 | 3 | 3 | 0.0000045928 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_575 | 3 | 6 | 0.000190348 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_219 | 4 | 4 | 0.00000000237746 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_220 | 4 | 4 | 0.00000000237746 |
| Helianthus annuus | HanXRQChr12 | 5 | CH_han_707 | 3 | 3 | 0.0000134039 |
| Lonicera japonica | GWHAAZE00000005 | 5 | CH_lonja_1009 | 3 | 7 | 0.000332835 |
| Malus domestica | Chr13 | 5 | CH_mdo_115 | 7 | 20 | 0.0000000000000367748 |
| Malus domestica | Chr14 | 5 | CH_mdo_714 | 3 | 3 | 0.00000875767 |
| Manihot esculenta | Chromosome01 | 5 | CH_mes_406 | 3 | 3 | 0.00000541984 |
| Medicago truncatula | chr1 | 5 | CH_mtr_1262 | 3 | 10 | 0.000403294 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_304 | 3 | 3 | 0.00000704428 |
| Prunus persica | Pp01 | 5 | CH_ppe_268 | 4 | 4 | 0.00000000603413 |
| Papaver somniferum | NW_020620381.1 | 5 | CH_pso_663 | 3 | 3 | 0.00000377638 |
| Papaver somniferum | NW_020623156.1 | 5 | CH_pso_748 | 3 | 4 | 0.0000151017 |
| Quercus lobata | 10 | 5 | CH_qlo_1091 | 3 | 3 | 0.00000919636 |
| Quercus lobata | 12 | 5 | CH_qlo_1350 | 3 | 5 | 0.0000918805 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_410 | 4 | 4 | 0.00000000168314 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_618 | 3 | 4 | 0.0000332159 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1190 | 3 | 3 | 0.00000042718 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_436 | 3 | 3 | 0.000003514 |
| Tripterygium wilfordii | NC_052233.1 | 5 | CH_twi_149 | 4 | 5 | 0.0000000276085 |
| Vitis vinifera | chr17 | 5 | CH_vvi_405 | 3 | 3 | 0.00000486007 |
| Zea mays | 1 | 5 | CH_zma_272 | 3 | 3 | 0.00000901994 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_25 | 5 | 5 | 0.00000000000000653601 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 6 | CH_arhy_831 | 3 | 3 | 0.0000218007 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1412 | 3 | 4 | 0.000125397 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1018 | 4 | 26 | 0.000117219 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_1156 | 3 | 6 | 0.000255735 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_700 | 4 | 11 | 0.00000260692 |
| Cicer arietinum L. | Ca_LG4_v3 | 6 | CH_car_157 | 3 | 4 | 0.0000132254 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_409 | 3 | 3 | 0.0000045928 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_575 | 3 | 6 | 0.000190348 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_219 | 4 | 4 | 0.00000000237746 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_220 | 4 | 4 | 0.00000000237746 |
| Helianthus annuus | HanXRQChr12 | 6 | CH_han_707 | 3 | 3 | 0.0000134039 |
| Lonicera japonica | GWHAAZE00000005 | 6 | CH_lonja_1009 | 3 | 7 | 0.000332835 |
| Malus domestica | Chr13 | 6 | CH_mdo_115 | 7 | 20 | 0.0000000000000367748 |
| Malus domestica | Chr14 | 6 | CH_mdo_714 | 3 | 3 | 0.00000875767 |
| Manihot esculenta | Chromosome01 | 6 | CH_mes_406 | 3 | 3 | 0.00000541984 |
| Medicago truncatula | chr1 | 6 | CH_mtr_1262 | 3 | 10 | 0.000403294 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_304 | 3 | 3 | 0.00000704428 |
| Prunus persica | Pp01 | 6 | CH_ppe_268 | 4 | 4 | 0.00000000603413 |
| Papaver somniferum | NW_020620381.1 | 6 | CH_pso_663 | 3 | 3 | 0.00000377638 |
| Papaver somniferum | NW_020623156.1 | 6 | CH_pso_748 | 3 | 4 | 0.0000151017 |
| Quercus lobata | 10 | 6 | CH_qlo_1091 | 3 | 3 | 0.00000919636 |
| Quercus lobata | 12 | 6 | CH_qlo_1350 | 3 | 5 | 0.0000918805 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_410 | 4 | 4 | 0.00000000168314 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_618 | 3 | 4 | 0.0000332159 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1190 | 3 | 3 | 0.00000042718 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_436 | 3 | 3 | 0.000003514 |
| Tripterygium wilfordii | NC_052233.1 | 6 | CH_twi_149 | 4 | 5 | 0.0000000276085 |
| Vitis vinifera | chr17 | 6 | CH_vvi_405 | 3 | 3 | 0.00000486007 |
| Zea mays | 1 | 6 | CH_zma_272 | 3 | 3 | 0.00000901994 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |