Functional clusters
Information
- Type InterPro
- Description Protein PYRICULARIA ORYZAE RESISTANCE 21
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 5 | CH_aar_403 | 2 | 2 | 0.000547395 |
| Brassica carinata | ChrC09 | 5 | CH_bca_716 | 3 | 6 | 0.00000076757 |
| Brassica napus | C01 | 5 | CH_bna_556 | 3 | 5 | 0.000000620097 |
| Brassica oleracea | C1 | 5 | CH_bol_738 | 2 | 3 | 0.000326861 |
| Camellia sinensis var. sinensis | Chr8 | 5 | CH_camsi_66 | 7 | 20 | 4.53906e-19 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_561 | 2 | 2 | 0.0000820311 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_547 | 2 | 2 | 0.000219346 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_97 | 8 | 12 | 3.66986e-25 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_140 | 4 | 7 | 0.0000000000214664 |
| Gossypium hirsutum | A10 | 5 | CH_ghi_1146 | 2 | 2 | 0.000400523 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_580 | 2 | 2 | 0.000321664 |
| Magnolia biondii | Chr19 | 5 | CH_mbi_598 | 3 | 20 | 0.00000403175 |
| Malus domestica | Chr10 | 5 | CH_mdo_489 | 3 | 5 | 0.000000215686 |
| Manihot esculenta | Chromosome09 | 5 | CH_mes_561 | 2 | 3 | 0.000183184 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_761 | 2 | 2 | 0.000792184 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_516 | 2 | 2 | 0.000225107 |
| Quercus lobata | 5 | 5 | CH_qlo_112 | 7 | 8 | 1.19359e-23 |
| Salix brachista | GWHAAZH00000006 | 5 | CH_sbr_555 | 2 | 2 | 0.000189042 |
| Vanilla planifolia | CM028154.1 | 5 | CH_vpl_494 | 3 | 34 | 0.00019563 |
| Aethionema arabicum | LG-10 | 6 | CH_aar_403 | 2 | 2 | 0.000547395 |
| Brassica carinata | ChrC09 | 6 | CH_bca_716 | 3 | 6 | 0.00000076757 |
| Brassica napus | C01 | 6 | CH_bna_556 | 3 | 5 | 0.000000620097 |
| Brassica oleracea | C1 | 6 | CH_bol_738 | 2 | 3 | 0.000326861 |
| Camellia sinensis var. sinensis | Chr8 | 6 | CH_camsi_66 | 7 | 20 | 4.53906e-19 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_561 | 2 | 2 | 0.0000820311 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_547 | 2 | 2 | 0.000219346 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_97 | 8 | 12 | 3.66986e-25 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_140 | 4 | 7 | 0.0000000000214664 |
| Gossypium hirsutum | A10 | 6 | CH_ghi_1146 | 2 | 2 | 0.000400523 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_580 | 2 | 2 | 0.000321664 |
| Magnolia biondii | Chr19 | 6 | CH_mbi_598 | 3 | 20 | 0.00000403175 |
| Malus domestica | Chr10 | 6 | CH_mdo_489 | 3 | 5 | 0.000000215686 |
| Manihot esculenta | Chromosome09 | 6 | CH_mes_561 | 2 | 3 | 0.000183184 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_761 | 2 | 2 | 0.000792184 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_516 | 2 | 2 | 0.000225107 |
| Quercus lobata | 5 | 6 | CH_qlo_112 | 7 | 8 | 1.19359e-23 |
| Salix brachista | GWHAAZH00000006 | 6 | CH_sbr_555 | 2 | 2 | 0.000189042 |
| Vanilla planifolia | CM028154.1 | 6 | CH_vpl_494 | 3 | 34 | 0.00019563 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |