Functional clusters
Information
- Type InterPro
- Description Chalcone--flavonone isomerase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group3 | 5 | CH_ach_475 | 2 | 2 | 0.000325928 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_511 | 3 | 3 | 0.000000161337 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_512 | 3 | 3 | 0.000000161337 |
| Amborella trichopoda | AmTr_v1.0_scaffold00034 | 5 | CH_atr_520 | 2 | 2 | 0.000238322 |
| Brassica carinata | ChrC07 | 5 | CH_bca_1817 | 2 | 2 | 0.000448905 |
| Brassica carinata | ChrB05 | 5 | CH_bca_1818 | 2 | 2 | 0.000448905 |
| Brassica napus | A09 | 5 | CH_bna_1380 | 2 | 2 | 0.000519726 |
| Brassica napus | C08 | 5 | CH_bna_1381 | 2 | 2 | 0.000519726 |
| Brassica oleracea | C8 | 5 | CH_bol_824 | 2 | 3 | 0.000588328 |
| Brassica rapa | A09 | 5 | CH_bra_591 | 2 | 3 | 0.000772726 |
| Camellia sinensis var. sinensis | Chr7 | 5 | CH_camsi_1233 | 2 | 2 | 0.000275128 |
| Camellia sinensis var. sinensis | Chr7 | 5 | CH_camsi_1234 | 2 | 2 | 0.000275128 |
| Cicer arietinum L. | Ca_LG4_v3 | 5 | CH_car_231 | 2 | 2 | 0.0000778301 |
| Coffea canephora | chr3 | 5 | CH_ccan_526 | 2 | 8 | 0.000191648 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_647 | 2 | 2 | 0.000207361 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 5 | CH_cqu_949 | 2 | 2 | 0.000473821 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1373 | 5 | CH_cqu_950 | 2 | 2 | 0.000473821 |
| Eucalyptus grandis | Chr10 | 5 | CH_egr_1200 | 2 | 2 | 0.000175582 |
| Glycine max | Gm20 | 5 | CH_gma_263 | 3 | 3 | 0.00000000864398 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_352 | 3 | 4 | 0.00000000895963 |
| Lotus japonicus | chr5 | 5 | CH_lja_55 | 4 | 4 | 0.00000000000109705 |
| Malus domestica | Chr07 | 5 | CH_mdo_1330 | 2 | 2 | 0.000568817 |
| Malus domestica | Chr01 | 5 | CH_mdo_208 | 4 | 6 | 0.000000000036807 |
| Medicago truncatula | chr1 | 5 | CH_mtr_101 | 6 | 8 | 5.16394e-19 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_515 | 2 | 2 | 0.000225107 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_254 | 3 | 9 | 0.000000342805 |
| Phaseolus vulgaris | Chr07 | 5 | CH_pvu_628 | 2 | 2 | 0.000440836 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_1152 | 2 | 2 | 0.000119596 |
| Simmondsia chinensis | GWHAASQ00000006 | 5 | CH_sci_319 | 2 | 2 | 0.0000851426 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_627 | 2 | 2 | 0.0000586941 |
| Solanum pennellii | Spenn-ch05 | 5 | CH_spe_570 | 2 | 2 | 0.000044479 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_326 | 3 | 7 | 0.000000281574 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 5 | CH_tpr_709 | 2 | 2 | 0.000454184 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_710 | 2 | 2 | 0.000454184 |
| Vigna mungo | CM024071.1 | 5 | CH_vmu_113 | 3 | 3 | 0.00000000626267 |
| Actinidia chinensis | Lachesis_group3 | 6 | CH_ach_475 | 2 | 2 | 0.000325928 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_511 | 3 | 3 | 0.000000161337 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_512 | 3 | 3 | 0.000000161337 |
| Amborella trichopoda | AmTr_v1.0_scaffold00034 | 6 | CH_atr_520 | 2 | 2 | 0.000238322 |
| Brassica carinata | ChrC07 | 6 | CH_bca_1817 | 2 | 2 | 0.000448905 |
| Brassica carinata | ChrB05 | 6 | CH_bca_1818 | 2 | 2 | 0.000448905 |
| Brassica napus | A09 | 6 | CH_bna_1380 | 2 | 2 | 0.000519726 |
| Brassica napus | C08 | 6 | CH_bna_1381 | 2 | 2 | 0.000519726 |
| Brassica oleracea | C8 | 6 | CH_bol_824 | 2 | 3 | 0.000588328 |
| Brassica rapa | A09 | 6 | CH_bra_591 | 2 | 3 | 0.000772726 |
| Camellia sinensis var. sinensis | Chr7 | 6 | CH_camsi_1233 | 2 | 2 | 0.000275128 |
| Camellia sinensis var. sinensis | Chr7 | 6 | CH_camsi_1234 | 2 | 2 | 0.000275128 |
| Cicer arietinum L. | Ca_LG4_v3 | 6 | CH_car_231 | 2 | 2 | 0.0000778301 |
| Coffea canephora | chr3 | 6 | CH_ccan_526 | 2 | 8 | 0.000191648 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_647 | 2 | 2 | 0.000207361 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 6 | CH_cqu_949 | 2 | 2 | 0.000473821 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1373 | 6 | CH_cqu_950 | 2 | 2 | 0.000473821 |
| Eucalyptus grandis | Chr10 | 6 | CH_egr_1200 | 2 | 2 | 0.000175582 |
| Glycine max | Gm20 | 6 | CH_gma_263 | 3 | 3 | 0.00000000864398 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_352 | 3 | 4 | 0.00000000895963 |
| Lotus japonicus | chr5 | 6 | CH_lja_55 | 4 | 4 | 0.00000000000109705 |
| Malus domestica | Chr07 | 6 | CH_mdo_1330 | 2 | 2 | 0.000568817 |
| Malus domestica | Chr01 | 6 | CH_mdo_208 | 4 | 6 | 0.000000000036807 |
| Medicago truncatula | chr1 | 6 | CH_mtr_101 | 6 | 8 | 5.16394e-19 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_515 | 2 | 2 | 0.000225107 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_254 | 3 | 9 | 0.000000342805 |
| Phaseolus vulgaris | Chr07 | 6 | CH_pvu_628 | 2 | 2 | 0.000440836 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_1152 | 2 | 2 | 0.000119596 |
| Simmondsia chinensis | GWHAASQ00000006 | 6 | CH_sci_319 | 2 | 2 | 0.0000851426 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_627 | 2 | 2 | 0.0000586941 |
| Solanum pennellii | Spenn-ch05 | 6 | CH_spe_570 | 2 | 2 | 0.000044479 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_326 | 3 | 7 | 0.000000281574 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 6 | CH_tpr_709 | 2 | 2 | 0.000454184 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_710 | 2 | 2 | 0.000454184 |
| Vigna mungo | CM024071.1 | 6 | CH_vmu_113 | 3 | 3 | 0.00000000626267 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |