Functional clusters

Information

  • Type InterPro
  • Description Nitrilase/Cyanide hydratase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_5 5 CH_aly_199 3 3 0.0000000261404
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 5 CH_amhyb_79 3 3 0.0000000106286
Arabidopsis thaliana Chr3 5 CH_ath_209 3 6 0.0000000984871
Amborella trichopoda AmTr_v1.0_scaffold00030 5 CH_atr_243 3 4 0.000000378627
Camellia sinensis var. sinensis Chr13 5 CH_camsi_1232 2 2 0.000275128
Carya illinoinensis Chr13 5 CH_cil_690 2 2 0.000185948
Capsella rubella scaffold_5 5 CH_cru_610 2 2 0.000438693
Davidia involucrata GWHABJS00000007 5 CH_din_521 2 3 0.000150034
Eucalyptus grandis Chr10 5 CH_egr_1286 2 2 0.000351165
Eutrema salsugineum scaffold_16 5 CH_esa_466 2 2 0.000456899
Lotus japonicus chr3 5 CH_lja_123 3 3 0.00000000767031
Lonicera japonica GWHAAZE00000002 5 CH_lonja_794 2 2 0.0000598874
Medicago truncatula chr4 5 CH_mtr_948 2 2 0.0000410863
Nicotiana tabacum Nitab4.5_0001135 5 CH_nta_228 2 2 0.000109727
Oryza sativa ssp. japonica chr02 5 CH_osa_504 2 2 0.0000528123
Punica granatum NC_045132.1 5 CH_pgr_434 2 2 0.0000750356
Papaver somniferum NC_039366.1 5 CH_pso_984 2 2 0.000135176
Papaver somniferum NC_039368.1 5 CH_pso_985 2 2 0.000135176
Salvia bowleyana GWHASIU00000006 5 CH_sbo_590 2 2 0.000136494
Simmondsia chinensis GWHAASQ00000012 5 CH_sci_472 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000006 5 CH_sci_473 2 2 0.000510856
Schrenkiella parvula ch5-2 5 CH_spa_339 2 2 0.000472404
Selenicereus undatus Scaffold_33675 5 CH_sun_213 2 2 0.0000726639
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_498 2 2 0.0000929238
Vitis vinifera chr2 5 CH_vvi_24 11 17 4.27152e-30
Vitis vinifera chr6 5 CH_vvi_402 3 3 0.00000394881
Arabidopsis lyrata scaffold_5 6 CH_aly_199 3 3 0.0000000261404
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 6 CH_amhyb_79 3 3 0.0000000106286
Arabidopsis thaliana Chr3 6 CH_ath_209 3 6 0.0000000984871
Amborella trichopoda AmTr_v1.0_scaffold00030 6 CH_atr_243 3 4 0.000000378627
Camellia sinensis var. sinensis Chr13 6 CH_camsi_1232 2 2 0.000275128
Carya illinoinensis Chr13 6 CH_cil_690 2 2 0.000185948
Capsella rubella scaffold_5 6 CH_cru_610 2 2 0.000438693
Davidia involucrata GWHABJS00000007 6 CH_din_521 2 3 0.000150034
Eucalyptus grandis Chr10 6 CH_egr_1286 2 2 0.000351165
Eutrema salsugineum scaffold_16 6 CH_esa_466 2 2 0.000456899
Lotus japonicus chr3 6 CH_lja_123 3 3 0.00000000767031
Lonicera japonica GWHAAZE00000002 6 CH_lonja_794 2 2 0.0000598874
Medicago truncatula chr4 6 CH_mtr_948 2 2 0.0000410863
Nicotiana tabacum Nitab4.5_0001135 6 CH_nta_228 2 2 0.000109727
Oryza sativa ssp. japonica chr02 6 CH_osa_504 2 2 0.0000528123
Punica granatum NC_045132.1 6 CH_pgr_434 2 2 0.0000750356
Papaver somniferum NC_039366.1 6 CH_pso_984 2 2 0.000135176
Papaver somniferum NC_039368.1 6 CH_pso_985 2 2 0.000135176
Salvia bowleyana GWHASIU00000006 6 CH_sbo_590 2 2 0.000136494
Simmondsia chinensis GWHAASQ00000012 6 CH_sci_472 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000006 6 CH_sci_473 2 2 0.000510856
Schrenkiella parvula ch5-2 6 CH_spa_339 2 2 0.000472404
Selenicereus undatus Scaffold_33675 6 CH_sun_213 2 2 0.0000726639
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_498 2 2 0.0000929238
Vitis vinifera chr2 6 CH_vvi_24 11 17 4.27152e-30
Vitis vinifera chr6 6 CH_vvi_402 3 3 0.00000394881

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001