Functional clusters

Information

  • Type InterPro
  • Description Peptidase S1, PA clan, chymotrypsin-like fold

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C04 5 CH_bna_944 3 6 0.0000338426
Brassica oleracea C4 5 CH_bol_204 4 8 0.0000000224237
Beta vulgaris Chr5_EL10_PGA_scaffold2 5 CH_bvu_246 3 3 0.00000169655
Chenopodium quinoa C_Quinoa_Scaffold_3422 5 CH_cqu_493 3 3 0.00000383916
Chlamydomonas reinhardtii chromosome_1 5 CH_cre_172 3 5 0.000391989
Magnolia biondii Chr02 5 CH_mbi_596 3 6 0.00000396128
Petunia axillaris Peaxi162Scf00475 5 CH_pax_286 3 3 0.00000270275
Papaver somniferum NC_039362.1 5 CH_pso_846 4 37 0.0000460453
Quercus lobata 5 5 CH_qlo_709 4 7 0.0000000197108
Rhododendron simsii chr02 5 CH_rsi_405 4 5 0.000000110397
Brassica napus C04 6 CH_bna_944 3 6 0.0000338426
Brassica oleracea C4 6 CH_bol_204 4 8 0.0000000224237
Beta vulgaris Chr5_EL10_PGA_scaffold2 6 CH_bvu_246 3 3 0.00000169655
Chenopodium quinoa C_Quinoa_Scaffold_3422 6 CH_cqu_493 3 3 0.00000383916
Chlamydomonas reinhardtii chromosome_1 6 CH_cre_172 3 5 0.000391989
Magnolia biondii Chr02 6 CH_mbi_596 3 6 0.00000396128
Petunia axillaris Peaxi162Scf00475 6 CH_pax_286 3 3 0.00000270275
Papaver somniferum NC_039362.1 6 CH_pso_846 4 37 0.0000460453
Quercus lobata 5 6 CH_qlo_709 4 7 0.0000000197108
Rhododendron simsii chr02 6 CH_rsi_405 4 5 0.000000110397

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001