Functional clusters

Information

  • Type InterPro
  • Description Glutathione S-transferase T1/2/3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_638 2 2 0.000070497
Actinidia chinensis Lachesis_group14 5 CH_ach_500 2 3 0.000488869
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 5 CH_amhyb_337 2 2 0.000252525
Beta vulgaris Chr5_EL10_PGA_scaffold2 5 CH_bvu_366 2 2 0.0000827917
Capsicum annuum PGAv.1.6.scaffold774 5 CH_can_353 3 4 0.000000818863
Coffea canephora chr8 5 CH_ccan_21 5 29 0.00000000000000615278
Chenopodium quinoa C_Quinoa_Scaffold_1280 5 CH_cqu_285 3 3 0.0000000336768
Chenopodium quinoa C_Quinoa_Scaffold_3489 5 CH_cqu_948 2 2 0.000473821
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_205 3 4 0.0000000120811
Gossypium hirsutum A08 5 CH_ghi_587 3 4 0.00000122334
Gossypium raimondii Chr04 5 CH_gra_677 2 2 0.00080416
Gossypium raimondii Chr07 5 CH_gra_678 2 2 0.00080416
Helianthus annuus HanXRQChr07 5 CH_han_1097 3 17 0.000434625
Helianthus annuus HanXRQChr13 5 CH_han_250 4 4 0.000000000123783
Helianthus annuus HanXRQChr13 5 CH_han_458 4 15 0.000000168669
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_6 11 11 6.02875e-38
Papaver somniferum NC_039361.1 5 CH_pso_40 7 8 5.30173e-22
Papaver somniferum NC_039365.1 5 CH_pso_48 7 10 7.95117e-21
Simmondsia chinensis GWHAASQ00000007 5 CH_sci_471 2 2 0.000510856
Selenicereus undatus Scaffold_33677 5 CH_sun_93 3 5 0.000000316773
Tripterygium wilfordii NC_052251.1 5 CH_twi_353 2 2 0.0000557507
Acer truncatum chr9 6 CH_acertr_638 2 2 0.000070497
Actinidia chinensis Lachesis_group14 6 CH_ach_500 2 3 0.000488869
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 6 CH_amhyb_337 2 2 0.000252525
Beta vulgaris Chr5_EL10_PGA_scaffold2 6 CH_bvu_366 2 2 0.0000827917
Capsicum annuum PGAv.1.6.scaffold774 6 CH_can_353 3 4 0.000000818863
Coffea canephora chr8 6 CH_ccan_21 5 29 0.00000000000000615278
Chenopodium quinoa C_Quinoa_Scaffold_1280 6 CH_cqu_285 3 3 0.0000000336768
Chenopodium quinoa C_Quinoa_Scaffold_3489 6 CH_cqu_948 2 2 0.000473821
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_205 3 4 0.0000000120811
Gossypium hirsutum A08 6 CH_ghi_587 3 4 0.00000122334
Gossypium raimondii Chr04 6 CH_gra_677 2 2 0.00080416
Gossypium raimondii Chr07 6 CH_gra_678 2 2 0.00080416
Helianthus annuus HanXRQChr07 6 CH_han_1097 3 17 0.000434625
Helianthus annuus HanXRQChr13 6 CH_han_250 4 4 0.000000000123783
Helianthus annuus HanXRQChr13 6 CH_han_458 4 15 0.000000168669
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_6 11 11 6.02875e-38
Papaver somniferum NC_039361.1 6 CH_pso_40 7 8 5.30173e-22
Papaver somniferum NC_039365.1 6 CH_pso_48 7 10 7.95117e-21
Simmondsia chinensis GWHAASQ00000007 6 CH_sci_471 2 2 0.000510856
Selenicereus undatus Scaffold_33677 6 CH_sun_93 3 5 0.000000316773
Tripterygium wilfordii NC_052251.1 6 CH_twi_353 2 2 0.0000557507

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001