Functional clusters
Information
- Type InterPro
- Description Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_174 | 4 | 4 | 0.00000000321663 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_11 | 5 | CH_amhyb_158 | 3 | 3 | 0.00000303978 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_181 | 4 | 6 | 0.0000000216541 |
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 5 | CH_atr_287 | 3 | 3 | 0.00000430731 |
| Brassica carinata | ChrC09 | 5 | CH_bca_1201 | 3 | 3 | 0.0000343513 |
| Brassica napus | C08 | 5 | CH_bna_1386 | 3 | 5 | 0.00054714 |
| Brassica napus | A09 | 5 | CH_bna_985 | 3 | 3 | 0.000054779 |
| Brassica oleracea | C1 | 5 | CH_bol_489 | 3 | 3 | 0.0000227409 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_272 | 3 | 3 | 0.00000699185 |
| Camellia sinensis var. sinensis | Chr9 | 5 | CH_camsi_179 | 6 | 12 | 0.000000000000424656 |
| Camellia sinensis var. sinensis | Chr5 | 5 | CH_camsi_341 | 4 | 4 | 0.00000000256149 |
| Coffea canephora | chr1 | 5 | CH_ccan_239 | 3 | 11 | 0.00000204225 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_412 | 3 | 3 | 0.0000045928 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_413 | 3 | 3 | 0.0000045928 |
| Corchorus olitorius | AWUE01014774.1 | 5 | CH_col_77 | 3 | 3 | 0.00000128001 |
| Carica papaya | supercontig_52 | 5 | CH_cpa_212 | 3 | 3 | 0.00000298254 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2924 | 5 | CH_cqu_538 | 3 | 3 | 0.00000875597 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_562 | 3 | 5 | 0.000262326 |
| Daucus carota | DCARv2_Chr8 | 5 | CH_dca_578 | 3 | 6 | 0.000316727 |
| Davidia involucrata | GWHABJS00000018 | 5 | CH_din_330 | 4 | 10 | 0.00000186604 |
| Davidia involucrata | GWHABJS00000014 | 5 | CH_din_402 | 3 | 3 | 0.0000137097 |
| Davidia involucrata | GWHABJS00000010 | 5 | CH_din_403 | 3 | 3 | 0.0000137097 |
| Durio zibethinus | NW_019167938.1 | 5 | CH_dzi_157 | 4 | 4 | 0.0000000107421 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_396 | 3 | 3 | 0.00000344319 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_929 | 3 | 3 | 0.000006834 |
| Erythranthe guttata | scaffold_7 | 5 | CH_egut_135 | 5 | 5 | 0.00000000000555326 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_490 | 3 | 4 | 0.0000141549 |
| Gossypium hirsutum | A03 | 5 | CH_ghi_437 | 4 | 4 | 0.0000000554947 |
| Gossypium hirsutum | A02 | 5 | CH_ghi_814 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | A12 | 5 | CH_ghi_815 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | D03 | 5 | CH_ghi_816 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | D02 | 5 | CH_ghi_817 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | D12 | 5 | CH_ghi_818 | 3 | 3 | 0.0000611258 |
| Glycine max | Gm16 | 5 | CH_gma_99 | 9 | 68 | 0.000000000000191142 |
| Gossypium raimondii | Chr03 | 5 | CH_gra_255 | 4 | 5 | 0.000000152546 |
| Gossypium raimondii | Chr05 | 5 | CH_gra_399 | 3 | 3 | 0.0000334986 |
| Gossypium raimondii | Chr08 | 5 | CH_gra_400 | 3 | 3 | 0.0000334986 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_329 | 4 | 4 | 0.00000000411184 |
| Hydrangea macrophylla | Hma1.2p1_1572F.1 | 5 | CH_hma_28 | 5 | 5 | 0.000000000000904847 |
| Lotus japonicus | chr3 | 5 | CH_lja_337 | 3 | 3 | 0.0000155247 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_663 | 3 | 3 | 0.0000196582 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_664 | 3 | 3 | 0.0000196582 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_68 | 11 | 22 | 5.62068e-25 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_531 | 3 | 3 | 0.0000115922 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_702 | 3 | 4 | 0.0000325365 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_945 | 3 | 6 | 0.000162544 |
| Malus domestica | Chr11 | 5 | CH_mdo_95 | 6 | 6 | 0.00000000000000343729 |
| Manihot esculenta | Chromosome03 | 5 | CH_mes_475 | 3 | 4 | 0.0000452596 |
| Medicago truncatula | chr1 | 5 | CH_mtr_493 | 4 | 5 | 0.0000000285 |
| Medicago truncatula | chr5 | 5 | CH_mtr_828 | 3 | 3 | 0.0000102807 |
| Nelumbo nucifera | chr6 | 5 | CH_nnu_45 | 6 | 7 | 0.0000000000000120866 |
| Olea europaea | chr16 | 5 | CH_oeu_109 | 4 | 4 | 0.0000000143579 |
| Olea europaea | chr16 | 5 | CH_oeu_264 | 3 | 3 | 0.000019212 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_209 | 5 | 12 | 0.00000000926647 |
| Petunia axillaris | Peaxi162Scf00131 | 5 | CH_pax_487 | 3 | 4 | 0.0000972314 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_524 | 3 | 5 | 0.000308136 |
| Prunus persica | Pp08 | 5 | CH_ppe_455 | 3 | 3 | 0.00000467444 |
| Papaver somniferum | NC_039367.1 | 5 | CH_pso_295 | 5 | 11 | 0.000000000586239 |
| Papaver somniferum | NC_039364.1 | 5 | CH_pso_394 | 4 | 5 | 0.0000000156713 |
| Populus trichocarpa | Chr02 | 5 | CH_ptr_270 | 4 | 4 | 0.0000000158772 |
| Populus trichocarpa | Chr05 | 5 | CH_ptr_490 | 3 | 3 | 0.0000203464 |
| Quercus lobata | 12 | 5 | CH_qlo_1070 | 3 | 3 | 0.0000070812 |
| Quercus lobata | 10 | 5 | CH_qlo_508 | 5 | 8 | 0.000000000100305 |
| Quercus lobata | 6 | 5 | CH_qlo_620 | 4 | 4 | 0.00000000365613 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_806 | 3 | 4 | 0.00000433784 |
| Rhododendron simsii | chr04 | 5 | CH_rsi_1000 | 3 | 8 | 0.000802283 |
| Striga asiatica | scaffold191 | 5 | CH_sas_129 | 3 | 4 | 0.0000539425 |
| Salix brachista | GWHAAZH00000005 | 5 | CH_sbr_197 | 4 | 4 | 0.00000000664754 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1149 | 4 | 5 | 0.000000258184 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1387 | 4 | 8 | 0.00000360565 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1885 | 3 | 3 | 0.000050514 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_2185 | 3 | 4 | 0.000201896 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_57 | 13 | 14 | 2.7781e-34 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_243 | 4 | 4 | 0.00000000906949 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_244 | 4 | 4 | 0.00000000906949 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_660 | 3 | 5 | 0.000134215 |
| Solanum pennellii | Spenn-ch09 | 5 | CH_spe_230 | 4 | 5 | 0.0000000197264 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_515 | 3 | 4 | 0.000030851 |
| Solanum tuberosum | ST4.03ch09 | 5 | CH_stu_274 | 4 | 4 | 0.00000000826684 |
| Solanum tuberosum | ST4.03ch09 | 5 | CH_stu_275 | 4 | 4 | 0.00000000826684 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_664 | 3 | 5 | 0.000128918 |
| Selenicereus undatus | Scaffold_10417 | 5 | CH_sun_46 | 4 | 4 | 0.00000000352245 |
| Trochodendron aralioides | group16 | 5 | CH_tar_105 | 5 | 5 | 0.0000000000231296 |
| Trochodendron aralioides | group1 | 5 | CH_tar_208 | 4 | 4 | 0.0000000265671 |
| Theobroma cacao | Chromosome_1 | 5 | CH_tca_234 | 4 | 4 | 0.00000000456849 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_435 | 3 | 3 | 0.00000779671 |
| Tripterygium wilfordii | NC_052253.1 | 5 | CH_twi_307 | 3 | 3 | 0.0000170362 |
| Vigna mungo | CM024071.1 | 5 | CH_vmu_254 | 3 | 3 | 0.00000606853 |
| Vitis vinifera | chr5 | 5 | CH_vvi_394 | 3 | 3 | 0.00000248211 |
| Vitis vinifera | chr7 | 5 | CH_vvi_448 | 3 | 5 | 0.000024805 |
| Zea mays | 1 | 5 | CH_zma_299 | 3 | 3 | 0.0000213969 |
| Acer truncatum | chr5 | 6 | CH_acertr_174 | 4 | 4 | 0.00000000321663 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_11 | 6 | CH_amhyb_158 | 3 | 3 | 0.00000303978 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_181 | 4 | 6 | 0.0000000216541 |
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 6 | CH_atr_287 | 3 | 3 | 0.00000430731 |
| Brassica carinata | ChrC09 | 6 | CH_bca_1201 | 3 | 3 | 0.0000343513 |
| Brassica napus | C08 | 6 | CH_bna_1386 | 3 | 5 | 0.00054714 |
| Brassica napus | A09 | 6 | CH_bna_985 | 3 | 3 | 0.000054779 |
| Brassica oleracea | C1 | 6 | CH_bol_489 | 3 | 3 | 0.0000227409 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_272 | 3 | 3 | 0.00000699185 |
| Camellia sinensis var. sinensis | Chr9 | 6 | CH_camsi_179 | 6 | 12 | 0.000000000000424656 |
| Camellia sinensis var. sinensis | Chr5 | 6 | CH_camsi_341 | 4 | 4 | 0.00000000256149 |
| Coffea canephora | chr1 | 6 | CH_ccan_239 | 3 | 11 | 0.00000204225 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_412 | 3 | 3 | 0.0000045928 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_413 | 3 | 3 | 0.0000045928 |
| Corchorus olitorius | AWUE01014774.1 | 6 | CH_col_77 | 3 | 3 | 0.00000128001 |
| Carica papaya | supercontig_52 | 6 | CH_cpa_212 | 3 | 3 | 0.00000298254 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2924 | 6 | CH_cqu_538 | 3 | 3 | 0.00000875597 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_562 | 3 | 5 | 0.000262326 |
| Daucus carota | DCARv2_Chr8 | 6 | CH_dca_578 | 3 | 6 | 0.000316727 |
| Davidia involucrata | GWHABJS00000018 | 6 | CH_din_330 | 4 | 10 | 0.00000186604 |
| Davidia involucrata | GWHABJS00000014 | 6 | CH_din_402 | 3 | 3 | 0.0000137097 |
| Davidia involucrata | GWHABJS00000010 | 6 | CH_din_403 | 3 | 3 | 0.0000137097 |
| Durio zibethinus | NW_019167938.1 | 6 | CH_dzi_157 | 4 | 4 | 0.0000000107421 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_396 | 3 | 3 | 0.00000344319 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_929 | 3 | 3 | 0.000006834 |
| Erythranthe guttata | scaffold_7 | 6 | CH_egut_135 | 5 | 5 | 0.00000000000555326 |
| Fragaria x ananassa | Fvb2-1 | 6 | CH_fan_799 | 3 | 3 | 0.0000739046 |
| Fragaria x ananassa | Fvb2-3 | 6 | CH_fan_886 | 3 | 5 | 0.000184685 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_490 | 3 | 4 | 0.0000141549 |
| Gossypium hirsutum | A03 | 6 | CH_ghi_437 | 4 | 4 | 0.0000000554947 |
| Gossypium hirsutum | A02 | 6 | CH_ghi_814 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | A12 | 6 | CH_ghi_815 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | D03 | 6 | CH_ghi_816 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | D02 | 6 | CH_ghi_817 | 3 | 3 | 0.0000611258 |
| Gossypium hirsutum | D12 | 6 | CH_ghi_818 | 3 | 3 | 0.0000611258 |
| Glycine max | Gm16 | 6 | CH_gma_99 | 9 | 68 | 0.000000000000191142 |
| Gossypium raimondii | Chr03 | 6 | CH_gra_255 | 4 | 5 | 0.000000152546 |
| Gossypium raimondii | Chr05 | 6 | CH_gra_399 | 3 | 3 | 0.0000334986 |
| Gossypium raimondii | Chr08 | 6 | CH_gra_400 | 3 | 3 | 0.0000334986 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_329 | 4 | 4 | 0.00000000411184 |
| Hydrangea macrophylla | Hma1.2p1_1572F.1 | 6 | CH_hma_28 | 5 | 5 | 0.000000000000904847 |
| Lotus japonicus | chr3 | 6 | CH_lja_337 | 3 | 3 | 0.0000155247 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_663 | 3 | 3 | 0.0000196582 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_664 | 3 | 3 | 0.0000196582 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_68 | 11 | 22 | 5.62068e-25 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_531 | 3 | 3 | 0.0000115922 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_702 | 3 | 4 | 0.0000325365 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_945 | 3 | 6 | 0.000162544 |
| Malus domestica | Chr11 | 6 | CH_mdo_95 | 6 | 6 | 0.00000000000000343729 |
| Manihot esculenta | Chromosome03 | 6 | CH_mes_475 | 3 | 4 | 0.0000452596 |
| Medicago truncatula | chr1 | 6 | CH_mtr_493 | 4 | 5 | 0.0000000285 |
| Medicago truncatula | chr5 | 6 | CH_mtr_828 | 3 | 3 | 0.0000102807 |
| Nelumbo nucifera | chr6 | 6 | CH_nnu_45 | 6 | 7 | 0.0000000000000120866 |
| Olea europaea | chr16 | 6 | CH_oeu_109 | 4 | 4 | 0.0000000143579 |
| Olea europaea | chr16 | 6 | CH_oeu_264 | 3 | 3 | 0.000019212 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_209 | 5 | 12 | 0.00000000926647 |
| Petunia axillaris | Peaxi162Scf00131 | 6 | CH_pax_487 | 3 | 4 | 0.0000972314 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_524 | 3 | 5 | 0.000308136 |
| Prunus persica | Pp08 | 6 | CH_ppe_455 | 3 | 3 | 0.00000467444 |
| Papaver somniferum | NC_039367.1 | 6 | CH_pso_295 | 5 | 11 | 0.000000000586239 |
| Papaver somniferum | NC_039364.1 | 6 | CH_pso_394 | 4 | 5 | 0.0000000156713 |
| Populus trichocarpa | Chr02 | 6 | CH_ptr_270 | 4 | 4 | 0.0000000158772 |
| Populus trichocarpa | Chr05 | 6 | CH_ptr_490 | 3 | 3 | 0.0000203464 |
| Quercus lobata | 12 | 6 | CH_qlo_1070 | 3 | 3 | 0.0000070812 |
| Quercus lobata | 10 | 6 | CH_qlo_508 | 5 | 8 | 0.000000000100305 |
| Quercus lobata | 6 | 6 | CH_qlo_620 | 4 | 4 | 0.00000000365613 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_806 | 3 | 4 | 0.00000433784 |
| Rhododendron simsii | chr04 | 6 | CH_rsi_1000 | 3 | 8 | 0.000802283 |
| Striga asiatica | scaffold191 | 6 | CH_sas_129 | 3 | 4 | 0.0000539425 |
| Salix brachista | GWHAAZH00000005 | 6 | CH_sbr_197 | 4 | 4 | 0.00000000664754 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1149 | 4 | 5 | 0.000000258184 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1387 | 4 | 8 | 0.00000360565 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1885 | 3 | 3 | 0.000050514 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_2185 | 3 | 4 | 0.000201896 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_57 | 13 | 14 | 2.7781e-34 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_243 | 4 | 4 | 0.00000000906949 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_244 | 4 | 4 | 0.00000000906949 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_660 | 3 | 5 | 0.000134215 |
| Solanum pennellii | Spenn-ch09 | 6 | CH_spe_230 | 4 | 5 | 0.0000000197264 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_515 | 3 | 4 | 0.000030851 |
| Solanum tuberosum | ST4.03ch09 | 6 | CH_stu_274 | 4 | 4 | 0.00000000826684 |
| Solanum tuberosum | ST4.03ch09 | 6 | CH_stu_275 | 4 | 4 | 0.00000000826684 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_664 | 3 | 5 | 0.000128918 |
| Selenicereus undatus | Scaffold_10417 | 6 | CH_sun_46 | 4 | 4 | 0.00000000352245 |
| Trochodendron aralioides | group16 | 6 | CH_tar_105 | 5 | 5 | 0.0000000000231296 |
| Trochodendron aralioides | group1 | 6 | CH_tar_208 | 4 | 4 | 0.0000000265671 |
| Theobroma cacao | Chromosome_1 | 6 | CH_tca_234 | 4 | 4 | 0.00000000456849 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_435 | 3 | 3 | 0.00000779671 |
| Tripterygium wilfordii | NC_052253.1 | 6 | CH_twi_307 | 3 | 3 | 0.0000170362 |
| Vigna mungo | CM024071.1 | 6 | CH_vmu_254 | 3 | 3 | 0.00000606853 |
| Vitis vinifera | chr5 | 6 | CH_vvi_394 | 3 | 3 | 0.00000248211 |
| Vitis vinifera | chr7 | 6 | CH_vvi_448 | 3 | 5 | 0.000024805 |
| Zea mays | 1 | 6 | CH_zma_299 | 3 | 3 | 0.0000213969 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |