Functional clusters

Information

  • Type InterPro
  • Description Cytochrome b561/Cytochrome b reductase 1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR03 5 CH_aox_246 3 5 0.00000540092
Amborella trichopoda AmTr_v1.0_scaffold00008 5 CH_atr_223 3 3 0.000000189332
Citrus clementina scaffold_2 5 CH_ccl_784 2 2 0.000820311
Ceratophyllum demersum 5 5 CH_cde_535 2 2 0.000789796
Carica papaya supercontig_2 5 CH_cpa_595 2 2 0.000570396
Daucus carota DCARv2_Chr8 5 CH_dca_764 2 2 0.000956663
Durio zibethinus NW_019167971.1 5 CH_dzi_646 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_771 2 2 0.000448722
Manihot esculenta Chromosome06 5 CH_mes_730 2 2 0.000915947
Manihot esculenta Chromosome17 5 CH_mes_731 2 2 0.000915947
Prunus persica Pp01 5 CH_ppe_860 2 2 0.000745962
Pisum sativum chr6LG2 5 CH_psa_747 2 2 0.000782452
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1407 2 2 0.000597979
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1408 2 2 0.000597979
Striga asiatica scaffold16 5 CH_sas_237 2 2 0.000625371
Sequoiadendron giganteum chr2 5 CH_sgi_632 4 5 0.0000000000606942
Solanum lycopersicum SL4.0ch01 5 CH_sly_905 2 2 0.000586941
Solanum pennellii Spenn-ch01 5 CH_spe_808 2 2 0.00044479
Solanum tuberosum ST4.03ch01 5 CH_stu_337 3 3 0.0000000787843
Tripterygium wilfordii NC_052253.1 5 CH_twi_537 2 3 0.00083626
Vitis vinifera chr1 5 CH_vvi_295 3 3 0.000000173574
Aquilegia oxysepala CHR03 6 CH_aox_246 3 5 0.00000540092
Amborella trichopoda AmTr_v1.0_scaffold00008 6 CH_atr_223 3 3 0.000000189332
Citrus clementina scaffold_2 6 CH_ccl_784 2 2 0.000820311
Ceratophyllum demersum 5 6 CH_cde_535 2 2 0.000789796
Carica papaya supercontig_2 6 CH_cpa_595 2 2 0.000570396
Daucus carota DCARv2_Chr8 6 CH_dca_764 2 2 0.000956663
Durio zibethinus NW_019167971.1 6 CH_dzi_646 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_771 2 2 0.000448722
Manihot esculenta Chromosome06 6 CH_mes_730 2 2 0.000915947
Manihot esculenta Chromosome17 6 CH_mes_731 2 2 0.000915947
Prunus persica Pp01 6 CH_ppe_860 2 2 0.000745962
Pisum sativum chr6LG2 6 CH_psa_747 2 2 0.000782452
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1407 2 2 0.000597979
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1408 2 2 0.000597979
Striga asiatica scaffold16 6 CH_sas_237 2 2 0.000625371
Sequoiadendron giganteum chr2 6 CH_sgi_632 4 5 0.0000000000606942
Solanum lycopersicum SL4.0ch01 6 CH_sly_905 2 2 0.000586941
Solanum pennellii Spenn-ch01 6 CH_spe_808 2 2 0.00044479
Solanum tuberosum ST4.03ch01 6 CH_stu_337 3 3 0.0000000787843
Tripterygium wilfordii NC_052253.1 6 CH_twi_537 2 3 0.00083626
Vitis vinifera chr1 6 CH_vvi_295 3 3 0.000000173574

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001