Functional clusters
Information
- Type InterPro
- Description Cyclin/Cyclin-like subunit Ssn8
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_8 | 5 | CH_aly_344 | 3 | 4 | 0.00000431216 |
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_559 | 3 | 12 | 0.000236731 |
| Brassica napus | C02 | 5 | CH_bna_878 | 3 | 5 | 0.000023221 |
| Brassica oleracea | C2 | 5 | CH_bol_87 | 5 | 8 | 0.00000000000410558 |
| Coffea canephora | chr3 | 5 | CH_ccan_609 | 2 | 4 | 0.000383296 |
| Gossypium hirsutum | D01 | 5 | CH_ghi_642 | 3 | 3 | 0.0000035036 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_135 | 6 | 6 | 8.67749e-17 |
| Magnolia biondii | Chr19 | 5 | CH_mbi_360 | 4 | 7 | 0.0000000367752 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_334 | 3 | 3 | 0.000000671187 |
| Olea europaea | chr14 | 5 | CH_oeu_653 | 3 | 39 | 0.000778778 |
| Physcomitrium patens | Chr02 | 5 | CH_ppa_80 | 3 | 3 | 0.00000204993 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1252 | 3 | 3 | 0.000000783163 |
| Sapria himalayana | scaffold11_13529635 | 5 | CH_shi_583 | 2 | 2 | 0.000857706 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_291 | 3 | 4 | 0.00000192504 |
| Arabidopsis lyrata | scaffold_8 | 6 | CH_aly_344 | 3 | 4 | 0.00000431216 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_559 | 3 | 12 | 0.000236731 |
| Brassica napus | C02 | 6 | CH_bna_878 | 3 | 5 | 0.000023221 |
| Brassica oleracea | C2 | 6 | CH_bol_87 | 5 | 8 | 0.00000000000410558 |
| Coffea canephora | chr3 | 6 | CH_ccan_609 | 2 | 4 | 0.000383296 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_1118 | 3 | 10 | 0.000562213 |
| Gossypium hirsutum | D01 | 6 | CH_ghi_642 | 3 | 3 | 0.0000035036 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_135 | 6 | 6 | 8.67749e-17 |
| Magnolia biondii | Chr19 | 6 | CH_mbi_360 | 4 | 7 | 0.0000000367752 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_334 | 3 | 3 | 0.000000671187 |
| Olea europaea | chr14 | 6 | CH_oeu_653 | 3 | 39 | 0.000778778 |
| Physcomitrium patens | Chr02 | 6 | CH_ppa_80 | 3 | 3 | 0.00000204993 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1252 | 3 | 3 | 0.000000783163 |
| Sapria himalayana | scaffold11_13529635 | 6 | CH_shi_583 | 2 | 2 | 0.000857706 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_291 | 3 | 4 | 0.00000192504 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |