Functional clusters
Information
- Type InterPro
- Description ATPase, nucleotide binding domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_362 | 5 | CH_aag_5 | 14 | 32 | 2.32028e-23 |
| Anthoceros agrestis | Sc2ySwM_117 | 5 | CH_aag_66 | 8 | 35 | 0.00000000312961 |
| Acer truncatum | chr12 | 5 | CH_acertr_390 | 6 | 32 | 0.00000254166 |
| Coffea canephora | chr2 | 5 | CH_ccan_213 | 5 | 78 | 0.000000727882 |
| Daucus carota | DCARv2_Chr7 | 5 | CH_dca_729 | 3 | 3 | 0.000899614 |
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_614 | 5 | 28 | 0.000222551 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_449 | 5 | 20 | 0.0000190815 |
| Manihot esculenta | Chromosome10 | 5 | CH_mes_552 | 5 | 30 | 0.000172458 |
| Prunus persica | Pp02 | 5 | CH_ppe_462 | 5 | 16 | 0.00000698866 |
| Papaver somniferum | NC_039367.1 | 5 | CH_pso_732 | 6 | 32 | 0.0000121066 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_486 | 4 | 11 | 0.00024193 |
| Anthoceros agrestis | Sc2ySwM_362 | 6 | CH_aag_5 | 14 | 32 | 2.32028e-23 |
| Anthoceros agrestis | Sc2ySwM_117 | 6 | CH_aag_66 | 8 | 35 | 0.00000000312961 |
| Acer truncatum | chr12 | 6 | CH_acertr_390 | 6 | 32 | 0.00000254166 |
| Coffea canephora | chr2 | 6 | CH_ccan_213 | 5 | 78 | 0.000000727882 |
| Daucus carota | DCARv2_Chr7 | 6 | CH_dca_729 | 3 | 3 | 0.000899614 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_614 | 5 | 28 | 0.000222551 |
| Fragaria x ananassa | Fvb7-4 | 6 | CH_fan_138 | 8 | 18 | 0.0000000000203124 |
| Fragaria x ananassa | Fvb7-3 | 6 | CH_fan_179 | 7 | 13 | 0.000000000285178 |
| Fragaria x ananassa | Fvb7-1 | 6 | CH_fan_275 | 6 | 11 | 0.0000000271921 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_352 | 6 | 14 | 0.000000175461 |
| Fragaria x ananassa | Fvb7-4 | 6 | CH_fan_665 | 5 | 12 | 0.0000163384 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_449 | 5 | 20 | 0.0000190815 |
| Manihot esculenta | Chromosome10 | 6 | CH_mes_552 | 5 | 30 | 0.000172458 |
| Prunus persica | Pp02 | 6 | CH_ppe_462 | 5 | 16 | 0.00000698866 |
| Papaver somniferum | NC_039367.1 | 6 | CH_pso_732 | 6 | 32 | 0.0000121066 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_486 | 4 | 11 | 0.00024193 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |