Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase COP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_789 2 2 0.000211491
Coffea canephora chr5 5 CH_ccan_244 3 32 0.00000244548
Cardamine hirsuta Chr4 5 CH_chi_523 2 2 0.0000691204
Daucus carota DCARv2_Chr2 5 CH_dca_655 2 3 0.000573967
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_840 2 4 0.00080764
Hydrangea macrophylla Hma1.2p1_0298F.1 5 CH_hma_590 2 2 0.000333259
Malus domestica Chr15 5 CH_mdo_1255 2 2 0.000379212
Sequoiadendron giganteum chr1 5 CH_sgi_982 3 5 0.0000000355966
Sapria himalayana scaffold10_15062905 5 CH_shi_411 2 3 0.000171536
Selenicereus undatus Scaffold_33676 5 CH_sun_85 3 4 0.000000126717
Vanilla planifolia CM028154.1 5 CH_vpl_144 3 6 0.000000163771
Acer truncatum chr10 6 CH_acertr_789 2 2 0.000211491
Coffea canephora chr5 6 CH_ccan_244 3 32 0.00000244548
Cardamine hirsuta Chr4 6 CH_chi_523 2 2 0.0000691204
Daucus carota DCARv2_Chr2 6 CH_dca_655 2 3 0.000573967
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_840 2 4 0.00080764
Hydrangea macrophylla Hma1.2p1_0298F.1 6 CH_hma_590 2 2 0.000333259
Malus domestica Chr15 6 CH_mdo_1255 2 2 0.000379212
Sequoiadendron giganteum chr1 6 CH_sgi_982 3 5 0.0000000355966
Sapria himalayana scaffold10_15062905 6 CH_shi_411 2 3 0.000171536
Selenicereus undatus Scaffold_33676 6 CH_sun_85 3 4 0.000000126717
Vanilla planifolia CM028154.1 6 CH_vpl_144 3 6 0.000000163771

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001