Functional clusters
Information
- Type InterPro
- Description Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB08 | 5 | CH_bca_1404 | 3 | 4 | 0.000114175 |
| Capsicum annuum | PGAv.1.6.scaffold1186 | 5 | CH_can_146 | 5 | 5 | 0.00000000000541693 |
| Capsicum annuum | PGAv.1.6.scaffold774 | 5 | CH_can_446 | 3 | 3 | 0.0000116704 |
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_31 | 5 | 8 | 0.00000000017898 |
| Carica papaya | supercontig_178 | 5 | CH_cpa_238 | 3 | 4 | 0.0000197303 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_238 | 5 | 33 | 0.0000000443549 |
| Erythranthe guttata | scaffold_11 | 5 | CH_egut_379 | 4 | 14 | 0.00000447287 |
| Helianthus annuus | HanXRQChr12 | 5 | CH_han_111 | 6 | 6 | 0.00000000000000142776 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_596 | 4 | 12 | 0.00000268701 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_689 | 3 | 3 | 0.0000100686 |
| Hydrangea macrophylla | Hma1.2p1_1195F.1 | 5 | CH_hma_182 | 3 | 3 | 0.00000103663 |
| Lupinus albus | Lalb_Chr18 | 5 | CH_lal_161 | 4 | 4 | 0.0000000255475 |
| Lupinus albus | Lalb_Chr03 | 5 | CH_lal_372 | 3 | 3 | 0.0000295004 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_336 | 4 | 9 | 0.000000021416 |
| Malus domestica | Chr09 | 5 | CH_mdo_402 | 4 | 6 | 0.0000000260598 |
| Medicago truncatula | chr2 | 5 | CH_mtr_103 | 8 | 12 | 5.58661e-19 |
| Medicago truncatula | chr7 | 5 | CH_mtr_166 | 7 | 12 | 0.00000000000000161044 |
| Medicago truncatula | chr2 | 5 | CH_mtr_850 | 3 | 3 | 0.0000151526 |
| Prunus persica | Pp04 | 5 | CH_ppe_414 | 3 | 3 | 0.00000137729 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_715 | 5 | 11 | 0.000000000655207 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_129 | 6 | 6 | 0.000000000000509028 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_328 | 4 | 4 | 0.000000222818 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_329 | 4 | 4 | 0.000000222818 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_433 | 4 | 6 | 0.00000333392 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_505 | 4 | 8 | 0.0000155194 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_662 | 3 | 3 | 0.000143247 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_663 | 3 | 3 | 0.000143247 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_107 | 7 | 10 | 0.00000000000000318458 |
| Solanum tuberosum | ST4.03ch10 | 5 | CH_stu_201 | 7 | 32 | 0.0000000000878274 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_124 | 5 | 10 | 0.00000000095988 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_253 | 3 | 4 | 0.00000540364 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1404 | 3 | 4 | 0.000114175 |
| Capsicum annuum | PGAv.1.6.scaffold1186 | 6 | CH_can_146 | 5 | 5 | 0.00000000000541693 |
| Capsicum annuum | PGAv.1.6.scaffold774 | 6 | CH_can_446 | 3 | 3 | 0.0000116704 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_31 | 5 | 8 | 0.00000000017898 |
| Carica papaya | supercontig_178 | 6 | CH_cpa_238 | 3 | 4 | 0.0000197303 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_238 | 5 | 33 | 0.0000000443549 |
| Erythranthe guttata | scaffold_11 | 6 | CH_egut_379 | 4 | 14 | 0.00000447287 |
| Fragaria x ananassa | Fvb6-4 | 6 | CH_fan_1140 | 3 | 9 | 0.000653669 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_948 | 3 | 7 | 0.00027253 |
| Helianthus annuus | HanXRQChr12 | 6 | CH_han_111 | 6 | 6 | 0.00000000000000142776 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_596 | 4 | 12 | 0.00000268701 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_689 | 3 | 3 | 0.0000100686 |
| Hydrangea macrophylla | Hma1.2p1_1195F.1 | 6 | CH_hma_182 | 3 | 3 | 0.00000103663 |
| Lupinus albus | Lalb_Chr18 | 6 | CH_lal_161 | 4 | 4 | 0.0000000255475 |
| Lupinus albus | Lalb_Chr03 | 6 | CH_lal_372 | 3 | 3 | 0.0000295004 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_336 | 4 | 9 | 0.000000021416 |
| Malus domestica | Chr09 | 6 | CH_mdo_402 | 4 | 6 | 0.0000000260598 |
| Medicago truncatula | chr2 | 6 | CH_mtr_103 | 8 | 12 | 5.58661e-19 |
| Medicago truncatula | chr7 | 6 | CH_mtr_166 | 7 | 12 | 0.00000000000000161044 |
| Medicago truncatula | chr2 | 6 | CH_mtr_850 | 3 | 3 | 0.0000151526 |
| Prunus persica | Pp04 | 6 | CH_ppe_414 | 3 | 3 | 0.00000137729 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_715 | 5 | 11 | 0.000000000655207 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_129 | 6 | 6 | 0.000000000000509028 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_328 | 4 | 4 | 0.000000222818 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_329 | 4 | 4 | 0.000000222818 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_433 | 4 | 6 | 0.00000333392 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_505 | 4 | 8 | 0.0000155194 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_662 | 3 | 3 | 0.000143247 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_663 | 3 | 3 | 0.000143247 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_107 | 7 | 10 | 0.00000000000000318458 |
| Solanum tuberosum | ST4.03ch10 | 6 | CH_stu_201 | 7 | 32 | 0.0000000000878274 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_124 | 5 | 10 | 0.00000000095988 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_253 | 3 | 4 | 0.00000540364 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |