Functional clusters
Information
- Type InterPro
- Description RNA polymerase Rpb1, domain 3 superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | ChrC | 5 | CH_ath_613 | 2 | 2 | 0.000601633 |
| Brassica oleracea | Boleracea_scaffold_45 | 5 | CH_bol_722 | 4 | 64 | 0.000318185 |
| Brassica rapa | Brapa_scaffold_151 | 5 | CH_bra_381 | 3 | 8 | 0.00012617 |
| Capsicum annuum | PGAv.1.6.scaffold939 | 5 | CH_can_755 | 3 | 13 | 0.000481696 |
| Lupinus albus | Lalb_Chr06 | 5 | CH_lal_737 | 3 | 10 | 0.000563792 |
| Arabidopsis thaliana | ChrC | 6 | CH_ath_613 | 2 | 2 | 0.000601633 |
| Brassica oleracea | Boleracea_scaffold_45 | 6 | CH_bol_722 | 4 | 64 | 0.000318185 |
| Brassica rapa | Brapa_scaffold_151 | 6 | CH_bra_381 | 3 | 8 | 0.00012617 |
| Capsicum annuum | PGAv.1.6.scaffold939 | 6 | CH_can_755 | 3 | 13 | 0.000481696 |
| Lupinus albus | Lalb_Chr06 | 6 | CH_lal_737 | 3 | 10 | 0.000563792 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |