Functional clusters
Information
- Type InterPro
- Description ANL, N-terminal domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr9 | 5 | CH_acertr_699 | 3 | 3 | 0.000195582 |
| Actinidia chinensis | Lachesis_group11 | 5 | CH_ach_414 | 3 | 3 | 0.000212043 |
| Actinidia chinensis | Lachesis_group6 | 5 | CH_ach_415 | 3 | 3 | 0.000212043 |
| Actinidia chinensis | Lachesis_group1 | 5 | CH_ach_636 | 3 | 4 | 0.000847042 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_207 | 3 | 3 | 0.0000825843 |
| Amborella trichopoda | AmTr_v1.0_scaffold00003 | 5 | CH_atr_535 | 3 | 4 | 0.000373694 |
| Brassica carinata | ChrB02 | 5 | CH_bca_1471 | 3 | 3 | 0.000139936 |
| Brassica carinata | ChrC07 | 5 | CH_bca_1858 | 3 | 4 | 0.000559265 |
| Brassica napus | C03 | 5 | CH_bna_1406 | 3 | 4 | 0.000580083 |
| Brassica napus | C08 | 5 | CH_bna_664 | 4 | 6 | 0.00000235995 |
| Brassica napus | C05 | 5 | CH_bna_737 | 4 | 7 | 0.00000550176 |
| Corylus avellana | 6 | 5 | CH_cav_420 | 4 | 8 | 0.0000216726 |
| Corylus avellana | 10 | 5 | CH_cav_446 | 4 | 9 | 0.0000389542 |
| Corylus avellana | 1 | 5 | CH_cav_469 | 4 | 10 | 0.0000648296 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_326 | 4 | 4 | 0.000000246764 |
| Carpinus fangiana | Cfa04 | 5 | CH_cfa_459 | 4 | 11 | 0.000221691 |
| Carpinus fangiana | Cfa07 | 5 | CH_cfa_521 | 3 | 3 | 0.000309655 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_860 | 3 | 5 | 0.000835709 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_1117 | 4 | 9 | 0.0000818154 |
| Eucalyptus grandis | Chr10 | 5 | CH_egr_723 | 5 | 9 | 0.00000016546 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_419 | 5 | 9 | 0.0000000472673 |
| Helianthus annuus | HanXRQChr07 | 5 | CH_han_950 | 3 | 3 | 0.000177133 |
| Lupinus albus | Lalb_Chr13 | 5 | CH_lal_194 | 4 | 4 | 0.000000127 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_480 | 5 | 15 | 0.000000350392 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_471 | 4 | 5 | 0.000000464767 |
| Magnolia biondii | Chr19 | 5 | CH_mbi_623 | 4 | 8 | 0.00000648807 |
| Nicotiana tabacum | Nitab4.5_0000030 | 5 | CH_nta_116 | 4 | 5 | 0.00000130705 |
| Petunia axillaris | Peaxi162Scf00017 | 5 | CH_pax_479 | 4 | 12 | 0.0000763321 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_582 | 3 | 3 | 0.000204556 |
| Quercus lobata | 7 | 5 | CH_qlo_1358 | 3 | 3 | 0.000110836 |
| Quercus lobata | CM012294 | 5 | CH_qlo_360 | 6 | 6 | 0.000000000000268053 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_1176 | 6 | 72 | 0.000151882 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_553 | 6 | 22 | 0.0000000777418 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_77 | 15 | 76 | 1.16688e-22 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_212 | 7 | 19 | 0.0000000000108443 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_2167 | 3 | 3 | 0.000170534 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_697 | 5 | 5 | 0.000000000407992 |
| Sapria himalayana | scaffold32_6892495 | 5 | CH_shi_235 | 3 | 5 | 0.000039993 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_394 | 4 | 5 | 0.00000128526 |
| Schrenkiella parvula | ch3-1 | 5 | CH_spa_117 | 4 | 4 | 0.000000218188 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_743 | 5 | 39 | 0.000710909 |
| Acer truncatum | chr9 | 6 | CH_acertr_699 | 3 | 3 | 0.000195582 |
| Actinidia chinensis | Lachesis_group11 | 6 | CH_ach_414 | 3 | 3 | 0.000212043 |
| Actinidia chinensis | Lachesis_group6 | 6 | CH_ach_415 | 3 | 3 | 0.000212043 |
| Actinidia chinensis | Lachesis_group1 | 6 | CH_ach_636 | 3 | 4 | 0.000847042 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_207 | 3 | 3 | 0.0000825843 |
| Amborella trichopoda | AmTr_v1.0_scaffold00003 | 6 | CH_atr_535 | 3 | 4 | 0.000373694 |
| Brassica carinata | ChrB02 | 6 | CH_bca_1471 | 3 | 3 | 0.000139936 |
| Brassica carinata | ChrC07 | 6 | CH_bca_1858 | 3 | 4 | 0.000559265 |
| Brassica napus | C03 | 6 | CH_bna_1406 | 3 | 4 | 0.000580083 |
| Brassica napus | C08 | 6 | CH_bna_664 | 4 | 6 | 0.00000235995 |
| Brassica napus | C05 | 6 | CH_bna_737 | 4 | 7 | 0.00000550176 |
| Corylus avellana | 6 | 6 | CH_cav_420 | 4 | 8 | 0.0000216726 |
| Corylus avellana | 10 | 6 | CH_cav_446 | 4 | 9 | 0.0000389542 |
| Corylus avellana | 1 | 6 | CH_cav_469 | 4 | 10 | 0.0000648296 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_326 | 4 | 4 | 0.000000246764 |
| Carpinus fangiana | Cfa04 | 6 | CH_cfa_459 | 4 | 11 | 0.000221691 |
| Carpinus fangiana | Cfa07 | 6 | CH_cfa_521 | 3 | 3 | 0.000309655 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_860 | 3 | 5 | 0.000835709 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_1117 | 4 | 9 | 0.0000818154 |
| Eucalyptus grandis | Chr10 | 6 | CH_egr_723 | 5 | 9 | 0.00000016546 |
| Fragaria x ananassa | Fvb1-4 | 6 | CH_fan_253 | 8 | 77 | 0.0000000114291 |
| Fragaria x ananassa | Fvb1-2 | 6 | CH_fan_689 | 6 | 61 | 0.0000210256 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_419 | 5 | 9 | 0.0000000472673 |
| Helianthus annuus | HanXRQChr07 | 6 | CH_han_950 | 3 | 3 | 0.000177133 |
| Lupinus albus | Lalb_Chr13 | 6 | CH_lal_194 | 4 | 4 | 0.000000127 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_480 | 5 | 15 | 0.000000350392 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_471 | 4 | 5 | 0.000000464767 |
| Magnolia biondii | Chr19 | 6 | CH_mbi_623 | 4 | 8 | 0.00000648807 |
| Nicotiana tabacum | Nitab4.5_0000030 | 6 | CH_nta_116 | 4 | 5 | 0.00000130705 |
| Petunia axillaris | Peaxi162Scf00017 | 6 | CH_pax_479 | 4 | 12 | 0.0000763321 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_582 | 3 | 3 | 0.000204556 |
| Quercus lobata | 7 | 6 | CH_qlo_1358 | 3 | 3 | 0.000110836 |
| Quercus lobata | CM012294 | 6 | CH_qlo_360 | 6 | 6 | 0.000000000000268053 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_1176 | 6 | 72 | 0.000151882 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_553 | 6 | 22 | 0.0000000777418 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_77 | 15 | 76 | 1.16688e-22 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_212 | 7 | 19 | 0.0000000000108443 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_2167 | 3 | 3 | 0.000170534 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_697 | 5 | 5 | 0.000000000407992 |
| Sapria himalayana | scaffold32_6892495 | 6 | CH_shi_235 | 3 | 5 | 0.000039993 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_394 | 4 | 5 | 0.00000128526 |
| Schrenkiella parvula | ch3-1 | 6 | CH_spa_117 | 4 | 4 | 0.000000218188 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_743 | 5 | 39 | 0.000710909 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |