Functional clusters
Information
- Type InterPro
- Description Plantacyanin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr6 | 5 | CH_acertr_175 | 4 | 13 | 0.00000000375584 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_105 | 3 | 3 | 0.00000000964818 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 5 | CH_atr_47 | 5 | 5 | 0.00000000000000179262 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_169 | 3 | 5 | 0.000000102813 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_87 | 7 | 26 | 1.73213e-17 |
| Cannabis sativa | NC_044377.1 | 5 | CH_cansat_103 | 4 | 6 | 0.000000000063703 |
| Capsicum annuum | PGAv.1.6.scaffold1305 | 5 | CH_can_234 | 3 | 3 | 0.0000000102372 |
| Citrullus lanatus | CG_Chr05 | 5 | CH_cla_88 | 3 | 3 | 0.0000000472204 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2081 | 5 | CH_cqu_734 | 2 | 2 | 0.000142146 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_211 | 3 | 5 | 0.00000041805 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_360 | 3 | 6 | 0.000000416397 |
| Helianthus annuus | HanXRQChr17 | 5 | CH_han_265 | 4 | 4 | 0.000000000315084 |
| Helianthus annuus | HanXRQChr11 | 5 | CH_han_54 | 8 | 14 | 1.56566e-21 |
| Lotus japonicus | chr4 | 5 | CH_lja_519 | 2 | 2 | 0.000429046 |
| Magnolia biondii | Chr12 | 5 | CH_mbi_1259 | 2 | 3 | 0.00087414 |
| Malus domestica | Chr15 | 5 | CH_mdo_938 | 2 | 2 | 0.000113763 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_212 | 4 | 11 | 0.0000000274593 |
| Quercus lobata | 7 | 5 | CH_qlo_1023 | 3 | 5 | 0.00000335772 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_549 | 2 | 3 | 0.000136491 |
| Sechium edule | LG04 | 5 | CH_sed_76 | 4 | 4 | 0.0000000000762607 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_223 | 3 | 3 | 0.00000000516764 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_192 | 3 | 3 | 0.00000000296764 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_84 | 5 | 6 | 3.10372e-16 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_586 | 2 | 2 | 0.000227092 |
| Utricularia gibba | unitig_27 | 5 | CH_ugi_39 | 3 | 4 | 0.0000000403912 |
| Vitis vinifera | chr12 | 5 | CH_vvi_272 | 3 | 3 | 0.000000086787 |
| Zea mays | 1 | 5 | CH_zma_176 | 3 | 3 | 0.00000013726 |
| Acer truncatum | chr6 | 6 | CH_acertr_175 | 4 | 13 | 0.00000000375584 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_105 | 3 | 3 | 0.00000000964818 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 6 | CH_atr_47 | 5 | 5 | 0.00000000000000179262 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_169 | 3 | 5 | 0.000000102813 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_87 | 7 | 26 | 1.73213e-17 |
| Cannabis sativa | NC_044377.1 | 6 | CH_cansat_103 | 4 | 6 | 0.000000000063703 |
| Capsicum annuum | PGAv.1.6.scaffold1305 | 6 | CH_can_234 | 3 | 3 | 0.0000000102372 |
| Citrullus lanatus | CG_Chr05 | 6 | CH_cla_88 | 3 | 3 | 0.0000000472204 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2081 | 6 | CH_cqu_734 | 2 | 2 | 0.000142146 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_211 | 3 | 5 | 0.00000041805 |
| Fragaria x ananassa | Fvb5-1 | 6 | CH_fan_1152 | 2 | 2 | 0.00066613 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_360 | 3 | 6 | 0.000000416397 |
| Helianthus annuus | HanXRQChr17 | 6 | CH_han_265 | 4 | 4 | 0.000000000315084 |
| Helianthus annuus | HanXRQChr11 | 6 | CH_han_54 | 8 | 14 | 1.56566e-21 |
| Lotus japonicus | chr4 | 6 | CH_lja_519 | 2 | 2 | 0.000429046 |
| Magnolia biondii | Chr12 | 6 | CH_mbi_1259 | 2 | 3 | 0.00087414 |
| Malus domestica | Chr15 | 6 | CH_mdo_938 | 2 | 2 | 0.000113763 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_212 | 4 | 11 | 0.0000000274593 |
| Quercus lobata | 7 | 6 | CH_qlo_1023 | 3 | 5 | 0.00000335772 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_549 | 2 | 3 | 0.000136491 |
| Sechium edule | LG04 | 6 | CH_sed_76 | 4 | 4 | 0.0000000000762607 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_223 | 3 | 3 | 0.00000000516764 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_192 | 3 | 3 | 0.00000000296764 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_84 | 5 | 6 | 3.10372e-16 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_586 | 2 | 2 | 0.000227092 |
| Utricularia gibba | unitig_27 | 6 | CH_ugi_39 | 3 | 4 | 0.0000000403912 |
| Vitis vinifera | chr12 | 6 | CH_vvi_272 | 3 | 3 | 0.000000086787 |
| Zea mays | 1 | 6 | CH_zma_176 | 3 | 3 | 0.00000013726 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |