Functional clusters
Information
- Type InterPro
- Description AAA ATPase, AAA+ lid domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB07 | 5 | CH_bca_704 | 4 | 4 | 0.000000660332 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_249 | 9 | 56 | 0.0000000000510568 |
| Capsicum annuum | PGAv.1.6.scaffold1046 | 5 | CH_can_344 | 5 | 11 | 0.000000609968 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_900 | 3 | 5 | 0.000981036 |
| Malus domestica | Chr11 | 5 | CH_mdo_1050 | 3 | 3 | 0.000164101 |
| Olea europaea | chr21 | 5 | CH_oeu_390 | 3 | 3 | 0.00011213 |
| Quercus lobata | 3 | 5 | CH_qlo_881 | 4 | 4 | 0.000000424776 |
| Selaginella moellendorffii | scaffold_73 | 5 | CH_smo_193 | 4 | 9 | 0.0000498143 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_730 | 3 | 4 | 0.00067296 |
| Vitis vinifera | chr16 | 5 | CH_vvi_553 | 3 | 3 | 0.000114941 |
| Brassica carinata | ChrB07 | 6 | CH_bca_704 | 4 | 4 | 0.000000660332 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_249 | 9 | 56 | 0.0000000000510568 |
| Capsicum annuum | PGAv.1.6.scaffold1046 | 6 | CH_can_344 | 5 | 11 | 0.000000609968 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_900 | 3 | 5 | 0.000981036 |
| Malus domestica | Chr11 | 6 | CH_mdo_1050 | 3 | 3 | 0.000164101 |
| Olea europaea | chr21 | 6 | CH_oeu_390 | 3 | 3 | 0.00011213 |
| Quercus lobata | 3 | 6 | CH_qlo_881 | 4 | 4 | 0.000000424776 |
| Selaginella moellendorffii | scaffold_73 | 6 | CH_smo_193 | 4 | 9 | 0.0000498143 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_730 | 3 | 4 | 0.00067296 |
| Vitis vinifera | chr16 | 6 | CH_vvi_553 | 3 | 3 | 0.000114941 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |