Functional clusters
Information
- Type InterPro
- Description Subtilisin-like protease, fibronectin type-III domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_447 | 3 | 3 | 0.00025312 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 5 | CH_arhy_172 | 9 | 25 | 0.0000000000000017657 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 5 | CH_arhy_748 | 4 | 7 | 0.00000820023 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_123 | 5 | 7 | 0.00000000036869 |
| Brassica carinata | Contig365 | 5 | CH_bca_1631 | 4 | 16 | 0.000272311 |
| Coffea canephora | chr10 | 5 | CH_ccan_167 | 4 | 13 | 0.0000000702424 |
| Coffea canephora | chr8 | 5 | CH_ccan_187 | 4 | 16 | 0.000000178748 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_253 | 5 | 6 | 0.0000000111099 |
| Citrus clementina | scaffold_8 | 5 | CH_ccl_406 | 4 | 5 | 0.00000403049 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_81 | 6 | 6 | 0.0000000000000508206 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_276 | 4 | 4 | 0.000000228181 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_391 | 4 | 7 | 0.00000795508 |
| Erythranthe guttata | scaffold_13 | 5 | CH_egut_179 | 6 | 7 | 0.000000000407493 |
| Erythranthe guttata | scaffold_5 | 5 | CH_egut_45 | 11 | 13 | 2.01575e-21 |
| Glycine max | Gm16 | 5 | CH_gma_486 | 4 | 6 | 0.0000081514 |
| Helianthus annuus | HanXRQChr03 | 5 | CH_han_862 | 3 | 3 | 0.0000847149 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_967 | 4 | 18 | 0.000255351 |
| Medicago truncatula | chr7 | 5 | CH_mtr_366 | 7 | 21 | 0.000000000640755 |
| Olea europaea | chr7 | 5 | CH_oeu_370 | 3 | 3 | 0.0000606491 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_215 | 4 | 4 | 0.0000000694921 |
| Papaver somniferum | NW_020619603.1 | 5 | CH_pso_208 | 7 | 18 | 0.00000000000557968 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_276 | 6 | 13 | 0.000000000282204 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_948 | 3 | 3 | 0.000126882 |
| Quercus lobata | 4 | 5 | CH_qlo_1635 | 3 | 3 | 0.00043877 |
| Quercus lobata | 8 | 5 | CH_qlo_363 | 7 | 9 | 0.000000000000339723 |
| Rhododendron simsii | chr07 | 5 | CH_rsi_258 | 5 | 5 | 0.000000000222737 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_72 | 12 | 45 | 1.18946e-19 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_40 | 10 | 10 | 3.24761e-23 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_810 | 3 | 3 | 0.000336094 |
| Solanum tuberosum | ST4.03ch10 | 5 | CH_stu_811 | 3 | 3 | 0.000336094 |
| Tarenaya hassleriana | NW_010960187.1 | 5 | CH_tha_217 | 3 | 3 | 0.000152401 |
| Tripterygium wilfordii | NC_052241.1 | 5 | CH_twi_70 | 7 | 13 | 0.0000000000166645 |
| Vanilla planifolia | CM028155.1 | 5 | CH_vpl_499 | 3 | 3 | 0.00021485 |
| Vitis vinifera | chr18 | 5 | CH_vvi_721 | 3 | 3 | 0.000517597 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_447 | 3 | 3 | 0.00025312 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 6 | CH_arhy_172 | 9 | 25 | 0.0000000000000017657 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 6 | CH_arhy_748 | 4 | 7 | 0.00000820023 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_123 | 5 | 7 | 0.00000000036869 |
| Brassica carinata | Contig365 | 6 | CH_bca_1631 | 4 | 16 | 0.000272311 |
| Coffea canephora | chr10 | 6 | CH_ccan_167 | 4 | 13 | 0.0000000702424 |
| Coffea canephora | chr8 | 6 | CH_ccan_187 | 4 | 16 | 0.000000178748 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_253 | 5 | 6 | 0.0000000111099 |
| Citrus clementina | scaffold_8 | 6 | CH_ccl_406 | 4 | 5 | 0.00000403049 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_81 | 6 | 6 | 0.0000000000000508206 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_276 | 4 | 4 | 0.000000228181 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_391 | 4 | 7 | 0.00000795508 |
| Erythranthe guttata | scaffold_13 | 6 | CH_egut_179 | 6 | 7 | 0.000000000407493 |
| Erythranthe guttata | scaffold_5 | 6 | CH_egut_45 | 11 | 13 | 2.01575e-21 |
| Glycine max | Gm16 | 6 | CH_gma_486 | 4 | 6 | 0.0000081514 |
| Helianthus annuus | HanXRQChr03 | 6 | CH_han_862 | 3 | 3 | 0.0000847149 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_967 | 4 | 18 | 0.000255351 |
| Medicago truncatula | chr7 | 6 | CH_mtr_366 | 7 | 21 | 0.000000000640755 |
| Olea europaea | chr7 | 6 | CH_oeu_370 | 3 | 3 | 0.0000606491 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_215 | 4 | 4 | 0.0000000694921 |
| Papaver somniferum | NW_020619603.1 | 6 | CH_pso_208 | 7 | 18 | 0.00000000000557968 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_276 | 6 | 13 | 0.000000000282204 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_948 | 3 | 3 | 0.000126882 |
| Quercus lobata | 4 | 6 | CH_qlo_1635 | 3 | 3 | 0.00043877 |
| Quercus lobata | 8 | 6 | CH_qlo_363 | 7 | 9 | 0.000000000000339723 |
| Rhododendron simsii | chr07 | 6 | CH_rsi_258 | 5 | 5 | 0.000000000222737 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_72 | 12 | 45 | 1.18946e-19 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_40 | 10 | 10 | 3.24761e-23 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_810 | 3 | 3 | 0.000336094 |
| Solanum tuberosum | ST4.03ch10 | 6 | CH_stu_811 | 3 | 3 | 0.000336094 |
| Tarenaya hassleriana | NW_010960187.1 | 6 | CH_tha_217 | 3 | 3 | 0.000152401 |
| Tripterygium wilfordii | NC_052241.1 | 6 | CH_twi_70 | 7 | 13 | 0.0000000000166645 |
| Vanilla planifolia | CM028155.1 | 6 | CH_vpl_499 | 3 | 3 | 0.00021485 |
| Vitis vinifera | chr18 | 6 | CH_vvi_721 | 3 | 3 | 0.000517597 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |