Functional clusters
Information
- Type InterPro
- Description Beta-galactosidase, beta-sandwich domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 5 | CH_amhyb_139 | 3 | 3 | 0.00000127543 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_605 | 3 | 5 | 0.0000765788 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 5 | CH_cqu_516 | 3 | 3 | 0.00000596416 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 5 | CH_cqu_517 | 3 | 3 | 0.00000596416 |
| Daucus carota | DCARv2_Chr3 | 5 | CH_dca_334 | 3 | 3 | 0.00000811507 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_934 | 3 | 3 | 0.00000791305 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_610 | 3 | 3 | 0.0000061331 |
| Quercus lobata | 11 | 5 | CH_qlo_1193 | 3 | 4 | 0.0000415639 |
| Sechium edule | LG08 | 5 | CH_sed_308 | 5 | 66 | 0.0000564366 |
| Theobroma cacao | Chromosome_1 | 5 | CH_tca_554 | 3 | 5 | 0.0000778928 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 6 | CH_amhyb_139 | 3 | 3 | 0.00000127543 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_605 | 3 | 5 | 0.0000765788 |
| Cucumis melo | chr02 | 6 | CH_cme_158 | 4 | 5 | 0.000000105708 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 6 | CH_cqu_516 | 3 | 3 | 0.00000596416 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 6 | CH_cqu_517 | 3 | 3 | 0.00000596416 |
| Daucus carota | DCARv2_Chr3 | 6 | CH_dca_334 | 3 | 3 | 0.00000811507 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_934 | 3 | 3 | 0.00000791305 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_610 | 3 | 3 | 0.0000061331 |
| Quercus lobata | 11 | 6 | CH_qlo_1193 | 3 | 4 | 0.0000415639 |
| Sechium edule | LG08 | 6 | CH_sed_308 | 5 | 66 | 0.0000564366 |
| Theobroma cacao | Chromosome_1 | 6 | CH_tca_554 | 3 | 5 | 0.0000778928 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |