Functional clusters
Information
- Type InterPro
- Description Alpha galactosidase, C-terminal beta sandwich domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr11 | 5 | CH_acertr_82 | 5 | 9 | 0.00000000000130671 |
Brassica carinata | ChrB01 | 5 | CH_bca_2160 | 2 | 2 | 0.000961939 |
Brassica carinata | ChrB01 | 5 | CH_bca_224 | 4 | 6 | 0.0000000000922991 |
Brassica napus | C02 | 5 | CH_bna_1377 | 2 | 2 | 0.000519726 |
Brassica oleracea | C3 | 5 | CH_bol_680 | 2 | 2 | 0.000196117 |
Brassica rapa | A02 | 5 | CH_bra_478 | 2 | 2 | 0.000257588 |
Carya illinoinensis | Chr16 | 5 | CH_cil_363 | 3 | 4 | 0.000000322727 |
Capsella rubella | scaffold_6 | 5 | CH_cru_608 | 2 | 2 | 0.000438693 |
Durio zibethinus | NW_019168048.1 | 5 | CH_dzi_321 | 3 | 7 | 0.0000135262 |
Malus domestica | Chr05 | 5 | CH_mdo_486 | 3 | 3 | 0.000000181193 |
Petunia axillaris | Peaxi162Scf00329 | 5 | CH_pax_651 | 2 | 2 | 0.000422134 |
Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_747 | 2 | 2 | 0.00068247 |
Simmondsia chinensis | GWHAASQ00000010 | 5 | CH_sci_345 | 3 | 19 | 0.000210279 |
Vanilla planifolia | CM028161.1 | 5 | CH_vpl_329 | 3 | 14 | 0.0000297793 |
Acer truncatum | chr11 | 6 | CH_acertr_82 | 5 | 9 | 0.00000000000130671 |
Brassica carinata | ChrB01 | 6 | CH_bca_2160 | 2 | 2 | 0.000961939 |
Brassica carinata | ChrB01 | 6 | CH_bca_224 | 4 | 6 | 0.0000000000922991 |
Brassica napus | C02 | 6 | CH_bna_1377 | 2 | 2 | 0.000519726 |
Brassica oleracea | C3 | 6 | CH_bol_680 | 2 | 2 | 0.000196117 |
Brassica rapa | A02 | 6 | CH_bra_478 | 2 | 2 | 0.000257588 |
Carya illinoinensis | Chr16 | 6 | CH_cil_363 | 3 | 4 | 0.000000322727 |
Capsella rubella | scaffold_6 | 6 | CH_cru_608 | 2 | 2 | 0.000438693 |
Durio zibethinus | NW_019168048.1 | 6 | CH_dzi_321 | 3 | 7 | 0.0000135262 |
Malus domestica | Chr05 | 6 | CH_mdo_486 | 3 | 3 | 0.000000181193 |
Petunia axillaris | Peaxi162Scf00329 | 6 | CH_pax_651 | 2 | 2 | 0.000422134 |
Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_747 | 2 | 2 | 0.00068247 |
Simmondsia chinensis | GWHAASQ00000010 | 6 | CH_sci_345 | 3 | 19 | 0.000210279 |
Vanilla planifolia | CM028161.1 | 6 | CH_vpl_329 | 3 | 14 | 0.0000297793 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |