Functional clusters

Information

  • Type InterPro
  • Description Glycosyl hydrolases family 38, C-terminal beta sandwich domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 5 CH_acertr_428 3 9 0.00000625889
Beta vulgaris Chr6_EL10_PGA_scaffold0 5 CH_bvu_513 2 3 0.000745074
Chenopodium quinoa C_Quinoa_Scaffold_1699 5 CH_cqu_1017 2 2 0.000710732
Davidia involucrata GWHABJS00000012 5 CH_din_593 2 2 0.000150038
Fragaria vesca Fvb5 5 CH_fve_837 2 2 0.000883652
Fragaria vesca Fvb6 5 CH_fve_838 2 2 0.000883652
Lotus japonicus chr1 5 CH_lja_545 2 2 0.000429046
Malus domestica Chr09 5 CH_mdo_1328 2 2 0.000568817
Manihot esculenta Chromosome02 5 CH_mes_695 2 2 0.000610631
Medicago truncatula chr7 5 CH_mtr_1189 2 2 0.000246518
Nelumbo nucifera chr4 5 CH_nnu_465 2 2 0.000144505
Prunus persica Pp03 5 CH_ppe_780 2 2 0.000447577
Phaseolus vulgaris Chr01 5 CH_pvu_692 2 2 0.000734727
Quercus lobata 10 5 CH_qlo_809 3 3 0.000000139945
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_832 3 9 0.00000700533
Trochodendron aralioides group0 5 CH_tar_710 2 2 0.00018011
Theobroma cacao Chromosome_4 5 CH_tca_695 2 2 0.000439432
Tripterygium wilfordii NC_052254.1 5 CH_twi_505 2 2 0.000557507
Vitis vinifera chr14 5 CH_vvi_788 2 2 0.00076063
Acer truncatum chr3 6 CH_acertr_428 3 9 0.00000625889
Beta vulgaris Chr6_EL10_PGA_scaffold0 6 CH_bvu_513 2 3 0.000745074
Chenopodium quinoa C_Quinoa_Scaffold_1699 6 CH_cqu_1017 2 2 0.000710732
Davidia involucrata GWHABJS00000012 6 CH_din_593 2 2 0.000150038
Fragaria vesca Fvb5 6 CH_fve_837 2 2 0.000883652
Fragaria vesca Fvb6 6 CH_fve_838 2 2 0.000883652
Lotus japonicus chr1 6 CH_lja_545 2 2 0.000429046
Malus domestica Chr09 6 CH_mdo_1328 2 2 0.000568817
Manihot esculenta Chromosome02 6 CH_mes_695 2 2 0.000610631
Medicago truncatula chr7 6 CH_mtr_1189 2 2 0.000246518
Nelumbo nucifera chr4 6 CH_nnu_465 2 2 0.000144505
Prunus persica Pp03 6 CH_ppe_780 2 2 0.000447577
Phaseolus vulgaris Chr01 6 CH_pvu_692 2 2 0.000734727
Quercus lobata 10 6 CH_qlo_809 3 3 0.000000139945
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_832 3 9 0.00000700533
Trochodendron aralioides group0 6 CH_tar_710 2 2 0.00018011
Theobroma cacao Chromosome_4 6 CH_tca_695 2 2 0.000439432
Tripterygium wilfordii NC_052254.1 6 CH_twi_505 2 2 0.000557507
Vitis vinifera chr14 6 CH_vvi_788 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001