Functional clusters

Information

  • Type InterPro
  • Description Exostosin, GT47 domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 5 CH_aag_219 3 4 0.0000888291
Acer truncatum chr4 5 CH_acertr_389 4 6 0.00000213551
Acer truncatum chr7 5 CH_acertr_667 3 3 0.0000987341
Acer truncatum chr7 5 CH_acertr_668 3 3 0.0000987341
Acer truncatum chr6 5 CH_acertr_669 3 3 0.0000987341
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 5 CH_amhyb_206 3 3 0.0000825843
Aquilegia oxysepala CHR07 5 CH_aox_452 3 4 0.000299547
Amborella trichopoda AmTr_v1.0_scaffold00046 5 CH_atr_332 4 12 0.0000232603
Amborella trichopoda AmTr_v1.0_scaffold00056 5 CH_atr_343 3 3 0.0000425525
Camellia sinensis var. sinensis Chr14 5 CH_camsi_1020 3 3 0.000119286
Camellia sinensis var. sinensis Chr1 5 CH_camsi_890 4 10 0.0000336669
Cannabis sativa NC_044377.1 5 CH_cansat_80 6 7 0.00000000000117132
Capsicum annuum PGAv.1.6.scaffold335 5 CH_can_517 3 3 0.0000507763
Cicer arietinum L. Ca_LG6_v3 5 CH_car_376 3 5 0.000593564
Corylus avellana 9 5 CH_cav_233 4 4 0.000000136937
Coffea canephora chr7 5 CH_ccan_125 5 55 0.00000000823413
Coffea canephora chr6 5 CH_ccan_389 3 11 0.0000553724
Carpinus fangiana Cfa02 5 CH_cfa_112 6 8 0.00000000000704402
Daucus carota DCARv2_Chr1 5 CH_dca_457 3 3 0.0000865811
Durio zibethinus NW_019167937.1 5 CH_dzi_410 3 3 0.0000994304
Durio zibethinus NW_019168004.1 5 CH_dzi_411 3 3 0.0000994304
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_499 3 3 0.0000346735
Fragaria vesca Fvb4 5 CH_fve_371 4 5 0.000000456498
Fragaria vesca Fvb1 5 CH_fve_569 3 3 0.0000738698
Fragaria vesca Fvb1 5 CH_fve_809 3 5 0.000737284
Glycine max Gm17 5 CH_gma_183 5 5 0.000000000268686
Glycine max Gm13 5 CH_gma_344 4 4 0.000000199395
Glycine max Gm06 5 CH_gma_345 4 4 0.000000199395
Helianthus annuus HanXRQChr10 5 CH_han_476 4 5 0.000000253277
Helianthus annuus HanXRQChr11 5 CH_han_837 3 3 0.0000524731
Hydrangea macrophylla Hma1.2p1_0945F.1 5 CH_hma_225 3 3 0.0000125877
Lupinus albus Lalb_Chr23 5 CH_lal_463 3 3 0.000108396
Lotus japonicus chr1 5 CH_lja_433 3 3 0.000116435
Lotus japonicus chr4 5 CH_lja_85 5 5 0.00000000026886
Lonicera japonica GWHAAZE00000007 5 CH_lonja_836 3 3 0.000105446
Lonicera japonica GWHAAZE00000007 5 CH_lonja_837 3 3 0.000105446
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_627 3 3 0.0000642624
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_739 3 4 0.000256825
Magnolia biondii Chr06 5 CH_mbi_671 4 13 0.0000180271
Malus domestica Chr02 5 CH_mdo_1057 3 3 0.000184041
Malus domestica Chr15 5 CH_mdo_1058 3 3 0.000184041
Malus domestica Chr15 5 CH_mdo_499 4 4 0.000000272193
Malus domestica Chr04 5 CH_mdo_592 4 5 0.00000135935
Malus domestica Chr04 5 CH_mdo_815 4 9 0.0000340932
Manihot esculenta Chromosome16 5 CH_mes_532 3 3 0.000109627
Oryza sativa ssp. japonica chr10 5 CH_osa_261 4 5 0.000000145833
Oryza sativa ssp. japonica chr03 5 CH_osa_553 3 4 0.000129942
Oryza sativa ssp. japonica chr01 5 CH_osa_668 3 5 0.000324627
Petunia axillaris Peaxi162Scf00227 5 CH_pax_483 3 3 0.0000852406
Prunus persica Pp01 5 CH_ppe_139 7 10 0.000000000000102051
Prunus persica Pp07 5 CH_ppe_646 3 3 0.00013535
Prunus persica Pp06 5 CH_ppe_791 3 4 0.000540714
Pisum sativum chr5LG3 5 CH_psa_512 3 4 0.0001491
Papaver somniferum NC_039360.1 5 CH_pso_302 5 7 0.000000000855484
Papaver somniferum NC_039359.1 5 CH_pso_352 5 9 0.00000000512575
Papaver somniferum NC_039365.1 5 CH_pso_674 6 70 0.00000420411
Populus trichocarpa Chr06 5 CH_ptr_203 5 5 0.000000000498088
Populus trichocarpa Chr18 5 CH_ptr_635 3 3 0.000180361
Phaseolus vulgaris Chr03 5 CH_pvu_244 4 4 0.000000108754
Quercus lobata 11 5 CH_qlo_1361 3 3 0.000116994
Quercus lobata CM012294 5 CH_qlo_530 5 5 0.000000000223159
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1042 3 3 0.0000625418
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1260 3 4 0.000249968
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_704 4 6 0.000000970784
Rhododendron simsii chr10 5 CH_rsi_21 16 22 7.28984e-36
Rhododendron simsii chr03 5 CH_rsi_915 4 15 0.000492931
Salvia bowleyana GWHASIU00000002 5 CH_sbo_462 4 14 0.0000314343
Salvia bowleyana GWHASIU00000006 5 CH_sbo_598 3 4 0.000142491
Salix brachista GWHAAZH00000006 5 CH_sbr_498 3 3 0.000116744
Salix brachista GWHAAZH00000007 5 CH_sbr_95 6 6 0.000000000000355342
Sequoiadendron giganteum chr10 5 CH_sgi_629 5 6 0.0000000000601226
Solanum lycopersicum SL4.0ch08 5 CH_sly_645 3 3 0.0000837933
Solanum pennellii Spenn-ch08 5 CH_spe_524 3 3 0.0000366237
Solanum tuberosum ST4.03ch08 5 CH_stu_845 3 5 0.000485367
Trochodendron aralioides group15 5 CH_tar_578 3 3 0.000105972
Trochodendron aralioides group10 5 CH_tar_579 3 3 0.000105972
Theobroma cacao Chromosome_5 5 CH_tca_364 4 5 0.000000799056
Theobroma cacao Chromosome_9 5 CH_tca_561 3 3 0.000106563
Tripterygium wilfordii NC_052250.1 5 CH_twi_209 4 4 0.000000449442
Tripterygium wilfordii NC_052239.1 5 CH_twi_29 8 9 3.96434e-17
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_407 3 3 0.0000847765
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_764 3 5 0.000845797
Vigna mungo CM024074.1 5 CH_vmu_161 4 4 0.0000000905924
Vitis vinifera chr11 5 CH_vvi_254 5 11 0.0000000374377
Zea mays 1 5 CH_zma_175 4 4 0.000000126837
Zea mays 1 5 CH_zma_87 5 5 0.000000000162146
Anthoceros agrestis Sc2ySwM_368 6 CH_aag_219 3 4 0.0000888291
Acer truncatum chr4 6 CH_acertr_389 4 6 0.00000213551
Acer truncatum chr7 6 CH_acertr_667 3 3 0.0000987341
Acer truncatum chr7 6 CH_acertr_668 3 3 0.0000987341
Acer truncatum chr6 6 CH_acertr_669 3 3 0.0000987341
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 6 CH_amhyb_206 3 3 0.0000825843
Aquilegia oxysepala CHR07 6 CH_aox_452 3 4 0.000299547
Amborella trichopoda AmTr_v1.0_scaffold00046 6 CH_atr_332 4 12 0.0000232603
Amborella trichopoda AmTr_v1.0_scaffold00056 6 CH_atr_343 3 3 0.0000425525
Camellia sinensis var. sinensis Chr14 6 CH_camsi_1020 3 3 0.000119286
Camellia sinensis var. sinensis Chr1 6 CH_camsi_890 4 10 0.0000336669
Cannabis sativa NC_044377.1 6 CH_cansat_80 6 7 0.00000000000117132
Capsicum annuum PGAv.1.6.scaffold335 6 CH_can_517 3 3 0.0000507763
Cicer arietinum L. Ca_LG6_v3 6 CH_car_376 3 5 0.000593564
Corylus avellana 9 6 CH_cav_233 4 4 0.000000136937
Coffea canephora chr7 6 CH_ccan_125 5 55 0.00000000823413
Coffea canephora chr6 6 CH_ccan_389 3 11 0.0000553724
Carpinus fangiana Cfa02 6 CH_cfa_112 6 8 0.00000000000704402
Daucus carota DCARv2_Chr1 6 CH_dca_457 3 3 0.0000865811
Durio zibethinus NW_019167937.1 6 CH_dzi_410 3 3 0.0000994304
Durio zibethinus NW_019168004.1 6 CH_dzi_411 3 3 0.0000994304
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_499 3 3 0.0000346735
Fragaria x ananassa Fvb1-4 6 CH_fan_1280 3 4 0.00091859
Fragaria x ananassa Fvb1-3 6 CH_fan_555 4 6 0.00000436157
Fragaria vesca Fvb4 6 CH_fve_371 4 5 0.000000456498
Fragaria vesca Fvb1 6 CH_fve_569 3 3 0.0000738698
Fragaria vesca Fvb1 6 CH_fve_809 3 5 0.000737284
Glycine max Gm17 6 CH_gma_183 5 5 0.000000000268686
Glycine max Gm13 6 CH_gma_344 4 4 0.000000199395
Glycine max Gm06 6 CH_gma_345 4 4 0.000000199395
Helianthus annuus HanXRQChr10 6 CH_han_476 4 5 0.000000253277
Helianthus annuus HanXRQChr11 6 CH_han_837 3 3 0.0000524731
Hydrangea macrophylla Hma1.2p1_0945F.1 6 CH_hma_225 3 3 0.0000125877
Lupinus albus Lalb_Chr23 6 CH_lal_463 3 3 0.000108396
Lotus japonicus chr1 6 CH_lja_433 3 3 0.000116435
Lotus japonicus chr4 6 CH_lja_85 5 5 0.00000000026886
Lonicera japonica GWHAAZE00000007 6 CH_lonja_836 3 3 0.000105446
Lonicera japonica GWHAAZE00000007 6 CH_lonja_837 3 3 0.000105446
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_627 3 3 0.0000642624
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_739 3 4 0.000256825
Magnolia biondii Chr06 6 CH_mbi_671 4 13 0.0000180271
Malus domestica Chr02 6 CH_mdo_1057 3 3 0.000184041
Malus domestica Chr15 6 CH_mdo_1058 3 3 0.000184041
Malus domestica Chr15 6 CH_mdo_499 4 4 0.000000272193
Malus domestica Chr04 6 CH_mdo_592 4 5 0.00000135935
Malus domestica Chr04 6 CH_mdo_815 4 9 0.0000340932
Manihot esculenta Chromosome16 6 CH_mes_532 3 3 0.000109627
Oryza sativa ssp. japonica chr10 6 CH_osa_261 4 5 0.000000145833
Oryza sativa ssp. japonica chr03 6 CH_osa_553 3 4 0.000129942
Oryza sativa ssp. japonica chr01 6 CH_osa_668 3 5 0.000324627
Petunia axillaris Peaxi162Scf00227 6 CH_pax_483 3 3 0.0000852406
Prunus persica Pp01 6 CH_ppe_139 7 10 0.000000000000102051
Prunus persica Pp07 6 CH_ppe_646 3 3 0.00013535
Prunus persica Pp06 6 CH_ppe_791 3 4 0.000540714
Pisum sativum chr5LG3 6 CH_psa_512 3 4 0.0001491
Papaver somniferum NC_039360.1 6 CH_pso_302 5 7 0.000000000855484
Papaver somniferum NC_039359.1 6 CH_pso_352 5 9 0.00000000512575
Papaver somniferum NC_039365.1 6 CH_pso_674 6 70 0.00000420411
Populus trichocarpa Chr06 6 CH_ptr_203 5 5 0.000000000498088
Populus trichocarpa Chr18 6 CH_ptr_635 3 3 0.000180361
Phaseolus vulgaris Chr03 6 CH_pvu_244 4 4 0.000000108754
Quercus lobata 11 6 CH_qlo_1361 3 3 0.000116994
Quercus lobata CM012294 6 CH_qlo_530 5 5 0.000000000223159
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1042 3 3 0.0000625418
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1260 3 4 0.000249968
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_704 4 6 0.000000970784
Rhododendron simsii chr10 6 CH_rsi_21 16 22 7.28984e-36
Rhododendron simsii chr03 6 CH_rsi_915 4 15 0.000492931
Salvia bowleyana GWHASIU00000002 6 CH_sbo_462 4 14 0.0000314343
Salvia bowleyana GWHASIU00000006 6 CH_sbo_598 3 4 0.000142491
Salix brachista GWHAAZH00000006 6 CH_sbr_498 3 3 0.000116744
Salix brachista GWHAAZH00000007 6 CH_sbr_95 6 6 0.000000000000355342
Sequoiadendron giganteum chr10 6 CH_sgi_629 5 6 0.0000000000601226
Solanum lycopersicum SL4.0ch08 6 CH_sly_645 3 3 0.0000837933
Solanum pennellii Spenn-ch08 6 CH_spe_524 3 3 0.0000366237
Solanum tuberosum ST4.03ch08 6 CH_stu_845 3 5 0.000485367
Trochodendron aralioides group15 6 CH_tar_578 3 3 0.000105972
Trochodendron aralioides group10 6 CH_tar_579 3 3 0.000105972
Theobroma cacao Chromosome_5 6 CH_tca_364 4 5 0.000000799056
Theobroma cacao Chromosome_9 6 CH_tca_561 3 3 0.000106563
Tripterygium wilfordii NC_052250.1 6 CH_twi_209 4 4 0.000000449442
Tripterygium wilfordii NC_052239.1 6 CH_twi_29 8 9 3.96434e-17
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_407 3 3 0.0000847765
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_764 3 5 0.000845797
Vigna mungo CM024074.1 6 CH_vmu_161 4 4 0.0000000905924
Vitis vinifera chr11 6 CH_vvi_254 5 11 0.0000000374377
Zea mays 1 6 CH_zma_175 4 4 0.000000126837
Zea mays 1 6 CH_zma_87 5 5 0.000000000162146

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001