Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group17 5 CH_ach_394 2 2 0.000162964
Brassica carinata ChrB02 5 CH_bca_1329 2 2 0.0000641293
Brassica oleracea C4 5 CH_bol_377 3 22 0.00000246724
Corylus avellana 8 5 CH_cav_545 2 2 0.0000766695
Erythranthe guttata scaffold_8 5 CH_egut_519 2 2 0.0000728147
Helianthus annuus HanXRQChr01 5 CH_han_821 2 2 0.0000386429
Malus domestica Chr11 5 CH_mdo_158 5 14 0.00000000000173792
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1151 2 2 0.000119596
Actinidia chinensis Lachesis_group17 6 CH_ach_394 2 2 0.000162964
Brassica carinata ChrB02 6 CH_bca_1329 2 2 0.0000641293
Brassica oleracea C4 6 CH_bol_377 3 22 0.00000246724
Corylus avellana 8 6 CH_cav_545 2 2 0.0000766695
Erythranthe guttata scaffold_8 6 CH_egut_519 2 2 0.0000728147
Helianthus annuus HanXRQChr01 6 CH_han_821 2 2 0.0000386429
Malus domestica Chr11 6 CH_mdo_158 5 14 0.00000000000173792
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1151 2 2 0.000119596

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001