Functional clusters

Information

  • Type InterPro
  • Description Transcription factor IIIC subunit Tfc1/Sfc1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 5 CH_amhyb_244 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00019 5 CH_atr_416 2 2 0.0000794407
Corylus avellana 9 5 CH_cav_543 2 2 0.0000766695
Coffea canephora chr6 5 CH_ccan_508 2 5 0.000153319
Capsella rubella scaffold_5 5 CH_cru_545 2 2 0.000219346
Lupinus albus Lalb_Chr05 5 CH_lal_420 2 2 0.0000524824
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1000 2 2 0.0000398653
Simmondsia chinensis GWHAASQ00000013 5 CH_sci_407 2 2 0.000255428
Sequoiadendron giganteum chr5 5 CH_sgi_981 3 5 0.0000000355966
Sapria himalayana scaffold1_25991295 5 CH_shi_409 2 3 0.000171536
Selenicereus undatus Scaffold_33679 5 CH_sun_152 3 27 0.0000231468
Trochodendron aralioides group1 5 CH_tar_708 2 2 0.00018011
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 6 CH_amhyb_244 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00019 6 CH_atr_416 2 2 0.0000794407
Corylus avellana 9 6 CH_cav_543 2 2 0.0000766695
Coffea canephora chr6 6 CH_ccan_508 2 5 0.000153319
Capsella rubella scaffold_5 6 CH_cru_545 2 2 0.000219346
Lupinus albus Lalb_Chr05 6 CH_lal_420 2 2 0.0000524824
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1000 2 2 0.0000398653
Simmondsia chinensis GWHAASQ00000013 6 CH_sci_407 2 2 0.000255428
Sequoiadendron giganteum chr5 6 CH_sgi_981 3 5 0.0000000355966
Sapria himalayana scaffold1_25991295 6 CH_shi_409 2 3 0.000171536
Selenicereus undatus Scaffold_33679 6 CH_sun_152 3 27 0.0000231468
Trochodendron aralioides group1 6 CH_tar_708 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001