Functional clusters

Information

  • Type InterPro
  • Description Protein crowded nuclei

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 5 CH_aar_402 2 2 0.000547395
Acer truncatum chr11 5 CH_acertr_1012 2 2 0.00070497
Arabidopsis thaliana Chr5 5 CH_ath_524 2 2 0.000286492
Davidia involucrata GWHABJS00000012 5 CH_din_825 2 2 0.000750188
Magnolia biondii Chr16 5 CH_mbi_780 2 2 0.0000485661
Quercus lobata 1 5 CH_qlo_749 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1340 2 2 0.000398653
Sequoiadendron giganteum chr5 5 CH_sgi_2133 2 2 0.000146145
Trochodendron aralioides group8 5 CH_tar_301 3 3 0.000000302778
Trochodendron aralioides group0 5 CH_tar_302 3 3 0.000000302778
Utricularia gibba unitig_8 5 CH_ugi_396 2 2 0.000820479
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_726 2 2 0.000557543
Vanilla planifolia CM028160.1 5 CH_vpl_638 2 2 0.000443328
Aethionema arabicum LG-2 6 CH_aar_402 2 2 0.000547395
Acer truncatum chr11 6 CH_acertr_1012 2 2 0.00070497
Arabidopsis thaliana Chr5 6 CH_ath_524 2 2 0.000286492
Davidia involucrata GWHABJS00000012 6 CH_din_825 2 2 0.000750188
Magnolia biondii Chr16 6 CH_mbi_780 2 2 0.0000485661
Quercus lobata 1 6 CH_qlo_749 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1340 2 2 0.000398653
Sequoiadendron giganteum chr5 6 CH_sgi_2133 2 2 0.000146145
Trochodendron aralioides group8 6 CH_tar_301 3 3 0.000000302778
Trochodendron aralioides group0 6 CH_tar_302 3 3 0.000000302778
Utricularia gibba unitig_8 6 CH_ugi_396 2 2 0.000820479
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_726 2 2 0.000557543
Vanilla planifolia CM028160.1 6 CH_vpl_638 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001